heudiconv_0.5.4-1~nd+1_all.deb


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Description

heudiconv - DICOM converter with support for structure heuristics

Property Value
Distribution Debian Sid
Repository NeuroDebian Main i386
Package filename heudiconv_0.5.4-1~nd+1_all.deb
Package name heudiconv
Package version 0.5.4
Package release 1~nd+1
Package architecture all
Package type deb
Category science
Homepage https://github.com/nipy/heudiconv
License -
Maintainer NeuroDebian Maintainers <team@neuro.debian.net>
Download size 248.61 KB
Installed size 979.00 KB
This is a flexible dicom converter for organizing brain imaging data into
structured directory layouts. It allows for flexible directory layouts and
naming schemes through customizable heuristics implementations.
It only converts the necessary dicoms, not everything in a directory.
It tracks the provenance of the conversion from dicom to nifti in w3c
prov format.

Alternatives

Package Version Architecture Repository
heudiconv_0.5.4-1~nd+1_all.deb 0.5.4 all NeuroDebian Main
heudiconv_0.5.3-1_all.deb 0.5.3 all Debian Main
heudiconv_0.5.3-1_all.deb 0.5.3 all Debian Main
heudiconv - - -

Requires

Name Value
dcm2niix -
neurodebian-popularity-contest -
python -
python-dcmstack -
python-dicom -
python-nibabel -
python-nipype -
python-numpy -
python-pathlib -

Download

Type URL
Mirror neurodebian.ovgu.de
Binary Package heudiconv_0.5.4-1~nd+1_all.deb
Source Package heudiconv

Install Howto

  1. Add the following line to /etc/apt/sources.list:
    deb http://neurodebian.ovgu.de/debian/ sid main contrib non-free
  2. Install GPG key of the repository:
    # sudo apt-key adv --recv-keys --keyserver hkp://pgp.mit.edu:80 0xA5D32F012649A5A9
  3. Update the package index:
    # sudo apt-get update
  4. Install heudiconv deb package:
    # sudo apt-get install heudiconv

Files

Path
/usr/bin/heudiconv
/usr/bin/heudiconv_monitor
/usr/lib/python2.7/dist-packages/Research/MCBI_TESTING/.heudiconv/crlab/info/crlab.auto.txt
/usr/lib/python2.7/dist-packages/Research/MCBI_TESTING/.heudiconv/crlab/info/crlab.edit.txt
/usr/lib/python2.7/dist-packages/Research/MCBI_TESTING/.heudiconv/crlab/info/dicominfo.tsv
/usr/lib/python2.7/dist-packages/Research/MCBI_TESTING/.heudiconv/crlab/info/filegroup.json
/usr/lib/python2.7/dist-packages/Research/MCBI_TESTING/.heudiconv/crlab/info/reproin.py
/usr/lib/python2.7/dist-packages/heudiconv/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/bids.py
/usr/lib/python2.7/dist-packages/heudiconv/convert.py
/usr/lib/python2.7/dist-packages/heudiconv/dicoms.py
/usr/lib/python2.7/dist-packages/heudiconv/info.py
/usr/lib/python2.7/dist-packages/heudiconv/parser.py
/usr/lib/python2.7/dist-packages/heudiconv/queue.py
/usr/lib/python2.7/dist-packages/heudiconv/utils.py
/usr/lib/python2.7/dist-packages/heudiconv-0.5.4.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/heudiconv-0.5.4.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/heudiconv-0.5.4.egg-info/entry_points.txt
/usr/lib/python2.7/dist-packages/heudiconv-0.5.4.egg-info/requires.txt
/usr/lib/python2.7/dist-packages/heudiconv-0.5.4.egg-info/top_level.txt
/usr/lib/python2.7/dist-packages/heudiconv/cli/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/cli/monitor.py
/usr/lib/python2.7/dist-packages/heudiconv/cli/run.py
/usr/lib/python2.7/dist-packages/heudiconv/external/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/external/dcmstack.py
/usr/lib/python2.7/dist-packages/heudiconv/external/dlad.py
/usr/lib/python2.7/dist-packages/heudiconv/external/pydicom.py
/usr/lib/python2.7/dist-packages/heudiconv/external/tests/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/external/tests/test_dlad.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/banda-bids.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/bids_ME.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/bids_with_ses.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/cmrr_heuristic.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/convertall.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/example.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/multires_7Tbold.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/reproin.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/studyforrest_phase2.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/test_reproin.py
/usr/lib/python2.7/dist-packages/heudiconv/heuristics/uc_bids.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/__init__.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/anonymize_script.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_dicoms.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_heuristics.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_main.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_monitor.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_queue.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_regression.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_tarballs.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/test_utils.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/utils.py
/usr/lib/python2.7/dist-packages/heudiconv/tests/data/axasc35.dcm
/usr/lib/python2.7/dist-packages/heudiconv/tests/data/01-anat-scout/0001.dcm
/usr/lib/python2.7/dist-packages/heudiconv/tests/data/01-fmap_acq-3mm/1.3.12.2.1107.5.2.43.66112.2016101409263663466202201.dcm
/usr/share/doc/heudiconv/changelog.Debian.gz
/usr/share/doc/heudiconv/changelog.gz
/usr/share/doc/heudiconv/copyright
/usr/share/man/man1/heudiconv.1.gz

See Also

Package Description
htcondor-dev_8.2.3~dfsg.1-5~nd+1_i386.deb distributed workload management system - development files
htcondor-doc_8.6.8~dfsg.1-1~nd+1_all.deb distributed workload management system - documentation
htcondor_8.2.3~dfsg.1-5~nd+1_i386.deb distributed workload management system
impressive_0.12.0-1~nd+1_all.deb PDF presentation tool with eye candies
incf-nidash-oneclick-clients_2.0-1~nd+1_all.deb utility for pushing DICOM data to the INCF datasharing server
init-system-helpers_1.18~nd+1_all.deb helper tools for all init systems
insighttoolkit4-examples_4.7.0-1~nd+1_all.deb Image processing toolkit for registration and segmentation - examples
insighttoolkit4-python_4.7.0-1~nd+1_i386.deb Image processing toolkit for registration and segmentation - Python bindings
ipython01x-doc_0.13.2-1~nd+1_all.deb enhanced interactive Python shell
ipython01x-notebook_0.13.2-1~nd+1_all.deb enhanced interactive Python shell -- notebook dummy package
ipython01x-parallel_0.13.2-1~nd+1_all.deb enhanced interactive Python shell
ipython01x-qtconsole_0.13.2-1~nd+1_all.deb enhanced interactive Python shell -- notebook dummy package
ipython01x_0.13.2-1~nd+1_all.deb enhanced interactive Python shell
ipython1x-doc_1.1.0+git7-gf5891e9-1~nd+1_all.deb enhanced interactive Python shell
ipython1x-notebook_1.1.0+git7-gf5891e9-1~nd+1_all.deb enhanced interactive Python shell -- notebook dummy package
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