r-bioc-biocparallel_1.18.1-1_i386.deb


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Description

r-bioc-biocparallel - BioConductor facilities for parallel evaluation

Property Value
Distribution Debian Sid
Repository Debian Main i386
Package filename r-bioc-biocparallel_1.18.1-1_i386.deb
Package name r-bioc-biocparallel
Package version 1.18.1
Package release 1
Package architecture i386
Package type deb
Category gnu-r
Homepage https://bioconductor.org/packages/BiocParallel/
License -
Maintainer Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Download size 1.01 MB
Installed size 1.42 MB

Alternatives

Package Version Architecture Repository
r-bioc-biocparallel_1.18.1-1_amd64.deb 1.18.1 amd64 Debian Main
r-bioc-biocparallel - - -

Requires

Name Value
libc6 >= 2.25
libgcc1 >= 1:3.0
libstdc++6 >= 5.2
r-api-3.5 -
r-api-bioc-3.9 -
r-base-core >= 3.6.1-4
r-cran-futile.logger -
r-cran-snow -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package r-bioc-biocparallel_1.18.1-1_i386.deb
Source Package r-bioc-biocparallel

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install r-bioc-biocparallel deb package:
    # sudo apt-get install r-bioc-biocparallel

Files

Path
/usr/lib/R/site-library/BiocParallel/DESCRIPTION
/usr/lib/R/site-library/BiocParallel/INDEX
/usr/lib/R/site-library/BiocParallel/NAMESPACE
/usr/lib/R/site-library/BiocParallel/NEWS
/usr/lib/R/site-library/BiocParallel/RMPInode.sh
/usr/lib/R/site-library/BiocParallel/RSOCKnode.sh
/usr/lib/R/site-library/BiocParallel/Meta/Rd.rds
/usr/lib/R/site-library/BiocParallel/Meta/features.rds
/usr/lib/R/site-library/BiocParallel/Meta/hsearch.rds
/usr/lib/R/site-library/BiocParallel/Meta/links.rds
/usr/lib/R/site-library/BiocParallel/Meta/nsInfo.rds
/usr/lib/R/site-library/BiocParallel/Meta/package.rds
/usr/lib/R/site-library/BiocParallel/Meta/vignette.rds
/usr/lib/R/site-library/BiocParallel/R/BiocParallel
/usr/lib/R/site-library/BiocParallel/R/BiocParallel.rdb
/usr/lib/R/site-library/BiocParallel/R/BiocParallel.rdx
/usr/lib/R/site-library/BiocParallel/doc/BiocParallel_BatchtoolsParam.R
/usr/lib/R/site-library/BiocParallel/doc/BiocParallel_BatchtoolsParam.Rnw
/usr/lib/R/site-library/BiocParallel/doc/BiocParallel_BatchtoolsParam.pdf
/usr/lib/R/site-library/BiocParallel/doc/Errors_Logs_And_Debugging.R
/usr/lib/R/site-library/BiocParallel/doc/Errors_Logs_And_Debugging.Rnw
/usr/lib/R/site-library/BiocParallel/doc/Errors_Logs_And_Debugging.pdf
/usr/lib/R/site-library/BiocParallel/doc/Introduction_To_BiocParallel.R
/usr/lib/R/site-library/BiocParallel/doc/Introduction_To_BiocParallel.Rnw
/usr/lib/R/site-library/BiocParallel/doc/Introduction_To_BiocParallel.pdf
/usr/lib/R/site-library/BiocParallel/doc/index.html
/usr/lib/R/site-library/BiocParallel/help/AnIndex
/usr/lib/R/site-library/BiocParallel/help/BiocParallel.rdb
/usr/lib/R/site-library/BiocParallel/help/BiocParallel.rdx
/usr/lib/R/site-library/BiocParallel/help/aliases.rds
/usr/lib/R/site-library/BiocParallel/help/paths.rds
/usr/lib/R/site-library/BiocParallel/html/00Index.html
/usr/lib/R/site-library/BiocParallel/html/R.css
/usr/lib/R/site-library/BiocParallel/libs/BiocParallel.so
/usr/lib/R/site-library/BiocParallel/snow/RMPInode.R
/usr/lib/R/site-library/BiocParallel/snow/RSOCKnode.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_BatchJobsParam.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_BatchtoolsParam.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_BiocParallelParam.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_SerialParam.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_SnowParam.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpaggregate.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpexportglobals.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpiterate.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bplapply.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bploop.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpmapply.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpvalidate.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpvec.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_bpvectorize.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_errorhandling.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_ipcmutex.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_logging.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_refclass.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_utilities.R
/usr/lib/R/site-library/BiocParallel/unitTests/test_script/test-sge-template.tmpl
/usr/share/doc/r-bioc-biocparallel/README.test
/usr/share/doc/r-bioc-biocparallel/changelog.Debian.gz
/usr/share/doc/r-bioc-biocparallel/copyright
/usr/share/lintian/overrides/r-bioc-biocparallel

Changelog

2019-08-22 - Andreas Tille <tille@debian.org>
r-bioc-biocparallel (1.18.1-1) unstable; urgency=medium
* New upstream version
* Fixed debian/watch for BioConductor
* debhelper-compat 12
* Set upstream metadata fields: Contact, Name.
2019-07-23 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.18.0-2) unstable; urgency=medium
* Team upload.
* Standards-Version: 4.4.0
* Add patch to disable two failing tests until we found a better solution.
(Closes: #914731)
2019-07-03 - Andreas Tille <tille@debian.org>
r-bioc-biocparallel (1.18.0-1) unstable; urgency=medium
* New upstream version
2019-02-12 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.6-1) unstable; urgency=medium
* Team upload.
* New upstream version
* debhelper 12
* Remove librt-linkage.patch, applied upstream.
2019-01-05 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.5-1) unstable; urgency=medium
* Team upload.
* New upstream version
2019-01-05 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.4-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.3.0
2018-12-03 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.2-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Remove boost_1.67.patch, applied upstream.
* Fix autopkgtest (Closes: #914731)
Remove useless patches: fix_syntax_of_test_script.patch
and ignore_test_requiring_rmpi.patch.
2018-11-29 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.1-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Add patch to fix FTBFS with boost 1.67 (Closes: #914708)
Thanks Graham Inggs.
* Add Testsuite: autopkgtest-pkg-r
2018-11-05 - Dylan Aïssi <daissi@debian.org>
r-bioc-biocparallel (1.16.0-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.2.1
2018-08-13 - Andreas Tille <tille@debian.org>
r-bioc-biocparallel (1.14.2-2) unstable; urgency=medium
* Test-Depends: r-cran-batchtools
Closes: #882371

See Also

Package Description
r-bioc-biomart_2.40.5+dfsg-1_all.deb GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
r-bioc-biomformat_1.12.0+dfsg-1_all.deb GNU R interface package for the BIOM file format
r-bioc-biostrings_2.52.0-1_i386.deb GNU R string objects representing biological sequences
r-bioc-biovizbase_1.32.0-1_i386.deb GNU R basic graphic utilities for visualization of genomic data
r-bioc-bitseq_1.28.0+dfsg-1_i386.deb transcript expression inference and analysis for RNA-seq data
r-bioc-bsgenome_1.52.0-1_all.deb BioConductor infrastructure for Biostrings-based genome data packages
r-bioc-cner_1.20.0+dfsg-1_i386.deb CNE Detection and Visualization
r-bioc-consensusclusterplus_1.48.0-1_all.deb GNU R determining cluster count and membership
r-bioc-cummerbund_2.26.0-1_all.deb tool for analysis of Cufflinks RNA-Seq output
r-bioc-delayedarray_0.10.0+dfsg-1_i386.deb BioConductor delayed operations on array-like objects
r-bioc-deseq2_1.24.0+dfsg-1_i386.deb R package for RNA-Seq Differential Expression Analysis
r-bioc-dirichletmultinomial_1.26.0-1_i386.deb Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
r-bioc-dnacopy_1.58.0-1_i386.deb R package: DNA copy number data analysis
r-bioc-ebseq_1.24.0-1_all.deb R package for RNA-Seq Differential Expression Analysis
r-bioc-ensembldb_2.8.0+dfsg-1_all.deb GNU R utilities to create and use an Ensembl based annotation database
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