toil_3.20.0-1_all.deb


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Description

toil - cross-platform workflow engine

Property Value
Distribution Debian Sid
Repository Debian Main amd64
Package filename toil_3.20.0-1_all.deb
Package name toil
Package version 3.20.0
Package release 1
Package architecture all
Package type deb
Category net
Homepage https://github.com/BD2KGenomics/toil
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 353.29 KB
Installed size 1.69 MB

Alternatives

Package Version Architecture Repository
toil_3.20.0-1_all.deb 3.20.0 all Debian Main
toil - - -

Requires

Name Value
cwltool -
python3-dateutil -
python3-dill -
python3-docker -
python3-future -
python3-psutil -
python3-requests -
python3-six >= 1.10.0
python3-sphinx -
python3:any -

Provides

Name Value
cwl-runner -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package toil_3.20.0-1_all.deb
Source Package toil

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install toil deb package:
    # sudo apt-get install toil

Files

Path
/usr/bin/_toil_worker
/usr/bin/toil
/usr/bin/toil-cwl-runner
/usr/bin/toil-wdl-runner
/usr/lib/python3/dist-packages/toil/__init__.py
/usr/lib/python3/dist-packages/toil/common.py
/usr/lib/python3/dist-packages/toil/fileStore.py
/usr/lib/python3/dist-packages/toil/job.py
/usr/lib/python3/dist-packages/toil/jobGraph.py
/usr/lib/python3/dist-packages/toil/leader.py
/usr/lib/python3/dist-packages/toil/realtimeLogger.py
/usr/lib/python3/dist-packages/toil/resource.py
/usr/lib/python3/dist-packages/toil/serviceManager.py
/usr/lib/python3/dist-packages/toil/statsAndLogging.py
/usr/lib/python3/dist-packages/toil/toilState.py
/usr/lib/python3/dist-packages/toil/version.py
/usr/lib/python3/dist-packages/toil/worker.py
/usr/lib/python3/dist-packages/toil-3.18.0.egg-info/PKG-INFO
/usr/lib/python3/dist-packages/toil-3.18.0.egg-info/dependency_links.txt
/usr/lib/python3/dist-packages/toil-3.18.0.egg-info/entry_points.txt
/usr/lib/python3/dist-packages/toil-3.18.0.egg-info/requires.txt
/usr/lib/python3/dist-packages/toil-3.18.0.egg-info/top_level.txt
/usr/lib/python3/dist-packages/toil/batchSystems/__init__.py
/usr/lib/python3/dist-packages/toil/batchSystems/abstractBatchSystem.py
/usr/lib/python3/dist-packages/toil/batchSystems/abstractGridEngineBatchSystem.py
/usr/lib/python3/dist-packages/toil/batchSystems/gridengine.py
/usr/lib/python3/dist-packages/toil/batchSystems/htcondor.py
/usr/lib/python3/dist-packages/toil/batchSystems/lsf.py
/usr/lib/python3/dist-packages/toil/batchSystems/lsfHelper.py
/usr/lib/python3/dist-packages/toil/batchSystems/options.py
/usr/lib/python3/dist-packages/toil/batchSystems/parasol.py
/usr/lib/python3/dist-packages/toil/batchSystems/parasolTestSupport.py
/usr/lib/python3/dist-packages/toil/batchSystems/registry.py
/usr/lib/python3/dist-packages/toil/batchSystems/singleMachine.py
/usr/lib/python3/dist-packages/toil/batchSystems/slurm.py
/usr/lib/python3/dist-packages/toil/batchSystems/torque.py
/usr/lib/python3/dist-packages/toil/batchSystems/mesos/__init__.py
/usr/lib/python3/dist-packages/toil/batchSystems/mesos/batchSystem.py
/usr/lib/python3/dist-packages/toil/batchSystems/mesos/conftest.py
/usr/lib/python3/dist-packages/toil/batchSystems/mesos/executor.py
/usr/lib/python3/dist-packages/toil/batchSystems/mesos/test/__init__.py
/usr/lib/python3/dist-packages/toil/cwl/__init__.py
/usr/lib/python3/dist-packages/toil/cwl/conftest.py
/usr/lib/python3/dist-packages/toil/cwl/cwltoil.py
/usr/lib/python3/dist-packages/toil/jobStores/__init__.py
/usr/lib/python3/dist-packages/toil/jobStores/abstractJobStore.py
/usr/lib/python3/dist-packages/toil/jobStores/azureJobStore.py
/usr/lib/python3/dist-packages/toil/jobStores/conftest.py
/usr/lib/python3/dist-packages/toil/jobStores/fileJobStore.py
/usr/lib/python3/dist-packages/toil/jobStores/googleJobStore.py
/usr/lib/python3/dist-packages/toil/jobStores/utils.py
/usr/lib/python3/dist-packages/toil/jobStores/aws/__init__.py
/usr/lib/python3/dist-packages/toil/jobStores/aws/jobStore.py
/usr/lib/python3/dist-packages/toil/jobStores/aws/utils.py
/usr/lib/python3/dist-packages/toil/lib/__init__.py
/usr/lib/python3/dist-packages/toil/lib/bioio.py
/usr/lib/python3/dist-packages/toil/lib/context.py
/usr/lib/python3/dist-packages/toil/lib/docker.py
/usr/lib/python3/dist-packages/toil/lib/ec2.py
/usr/lib/python3/dist-packages/toil/lib/ec2nodes.py
/usr/lib/python3/dist-packages/toil/lib/exceptions.py
/usr/lib/python3/dist-packages/toil/lib/expando.py
/usr/lib/python3/dist-packages/toil/lib/fnmatch.py
/usr/lib/python3/dist-packages/toil/lib/generatedEC2Lists.py
/usr/lib/python3/dist-packages/toil/lib/humanize.py
/usr/lib/python3/dist-packages/toil/lib/iterables.py
/usr/lib/python3/dist-packages/toil/lib/memoize.py
/usr/lib/python3/dist-packages/toil/lib/message.py
/usr/lib/python3/dist-packages/toil/lib/misc.py
/usr/lib/python3/dist-packages/toil/lib/objects.py
/usr/lib/python3/dist-packages/toil/lib/retry.py
/usr/lib/python3/dist-packages/toil/lib/threading.py
/usr/lib/python3/dist-packages/toil/lib/throttle.py
/usr/lib/python3/dist-packages/toil/lib/encryption/__init__.py
/usr/lib/python3/dist-packages/toil/lib/encryption/_dummy.py
/usr/lib/python3/dist-packages/toil/lib/encryption/_nacl.py
/usr/lib/python3/dist-packages/toil/lib/encryption/conftest.py
/usr/lib/python3/dist-packages/toil/provisioners/__init__.py
/usr/lib/python3/dist-packages/toil/provisioners/abstractProvisioner.py
/usr/lib/python3/dist-packages/toil/provisioners/ansibleDriver.py
/usr/lib/python3/dist-packages/toil/provisioners/clusterScaler.py
/usr/lib/python3/dist-packages/toil/provisioners/gceProvisioner.py
/usr/lib/python3/dist-packages/toil/provisioners/node.py
/usr/lib/python3/dist-packages/toil/provisioners/aws/__init__.py
/usr/lib/python3/dist-packages/toil/provisioners/aws/awsProvisioner.py
/usr/lib/python3/dist-packages/toil/provisioners/azure/__init__.py
/usr/lib/python3/dist-packages/toil/provisioners/azure/azureProvisioner.py
/usr/lib/python3/dist-packages/toil/provisioners/azure/create-azure-cluster.yml
/usr/lib/python3/dist-packages/toil/provisioners/azure/create-azure-resourcegroup.yml
/usr/lib/python3/dist-packages/toil/provisioners/azure/create-azure-vm.yml
/usr/lib/python3/dist-packages/toil/provisioners/azure/delete-azure-cluster.yml
/usr/lib/python3/dist-packages/toil/provisioners/azure/delete-azure-vm.yml
/usr/lib/python3/dist-packages/toil/test/__init__.py
/usr/lib/python3/dist-packages/toil/utils/__init__.py
/usr/lib/python3/dist-packages/toil/utils/toilClean.py
/usr/lib/python3/dist-packages/toil/utils/toilDebugFile.py
/usr/lib/python3/dist-packages/toil/utils/toilDebugJob.py
/usr/lib/python3/dist-packages/toil/utils/toilDestroyCluster.py
/usr/lib/python3/dist-packages/toil/utils/toilKill.py
/usr/lib/python3/dist-packages/toil/utils/toilLaunchCluster.py
/usr/lib/python3/dist-packages/toil/utils/toilMain.py
/usr/lib/python3/dist-packages/toil/utils/toilRsyncCluster.py
/usr/lib/python3/dist-packages/toil/utils/toilSshCluster.py
/usr/lib/python3/dist-packages/toil/utils/toilStats.py
/usr/lib/python3/dist-packages/toil/utils/toilStatus.py
/usr/lib/python3/dist-packages/toil/utils/toilUpdateEC2Instances.py
/usr/lib/python3/dist-packages/toil/wdl/__init__.py
/usr/lib/python3/dist-packages/toil/wdl/toilwdl.py
/usr/lib/python3/dist-packages/toil/wdl/wdl_analysis.py
/usr/lib/python3/dist-packages/toil/wdl/wdl_functions.py
/usr/lib/python3/dist-packages/toil/wdl/wdl_parser.py
/usr/lib/python3/dist-packages/toil/wdl/wdl_synthesis.py
/usr/share/doc/toil/README.Debian
/usr/share/doc/toil/TODO.Debian
/usr/share/doc/toil/changelog.Debian.gz
/usr/share/doc/toil/copyright
/usr/share/man/man1/_toil_worker.1.gz
/usr/share/man/man1/toil.1.gz

Changelog

2019-03-20 - Michael R. Crusoe <michael.crusoe@gmail.com>
toil (3.20.0-1) unstable; urgency=medium
[ Michael R. Crusoe ]
* Make the build reproducible, patch from lamby@debian.org; thanks!
(Closes: #925191)
* Update the patches.
[ Andreas Tille ]
* debhelper-compat 12
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.4.0
2019-01-13 - Michael R. Crusoe <michael.crusoe@gmail.com>
toil (3.18.0-2) unstable; urgency=medium
* Remove errant recommend on python3-futures and depends on python3-pytest*
(Closes: #919228)
* Refined the package description, added 'Provides: cwl-runner'
* Remove the partial mesos support until python3-mesos is packaged
* Suggests: docker.io | singularity-container | docker-ce
* Added debian/TODO, updated debian/README.{debian,source}
* Add basic smoke test ( `toil* --help` ) as an AutoPkgTest
2019-01-07 - Michael R. Crusoe <michael.crusoe@gmail.com>
toil (3.18.0-1) unstable; urgency=medium
* Initial release (Closes: #851365)

See Also

Package Description
toilet-fonts_0.3-1.2_all.deb collection of TOIlet fonts
toilet_0.3-1.2_amd64.deb display large colourful characters in text mode
tokyocabinet-bin_1.4.48-12_amd64.deb Tokyo Cabinet Database Utilities
tokyocabinet-doc_1.4.48-12_all.deb Tokyo Cabinet Database Documentation
tokyotyrant-doc_1.1.40-4.2_all.deb Tokyo Tyrant documentation
tokyotyrant-utils_1.1.40-4.2+b1_amd64.deb Tokyo Tyrant utilities
tokyotyrant_1.1.40-4.2+b1_amd64.deb Tokyo Tyrant: network interface to Tokyo Cabinet
tomatoes-data_1.55-9_all.deb I Have No Tomatoes - tomato smashing game - music files
tomatoes_1.55-9_amd64.deb I Have No Tomatoes - tomato smashing game
tomb_2.6+dfsg1-2_amd64.deb crypto undertaker
tomcat9-admin_9.0.27-1_all.deb Apache Tomcat 9 - Servlet and JSP engine -- admin web applications
tomcat9-common_9.0.27-1_all.deb Apache Tomcat 9 - Servlet and JSP engine -- common files
tomcat9-docs_9.0.27-1_all.deb Apache Tomcat 9 - Servlet and JSP engine -- documentation
tomcat9-examples_9.0.27-1_all.deb Apache Tomcat 9 - Servlet and JSP engine -- example web applications
tomcat9-user_9.0.27-1_all.deb Apache Tomcat 9 - Servlet and JSP engine -- tools to create user instances
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