r-bioc-annotationdbi_1.46.1-1_all.deb


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Description

r-bioc-annotationdbi - GNU R Annotation Database Interface for BioConductor

Property Value
Distribution Debian Sid
Repository Debian Main amd64
Package filename r-bioc-annotationdbi_1.46.1-1_all.deb
Package name r-bioc-annotationdbi
Package version 1.46.1
Package release 1
Package architecture all
Package type deb
Category gnu-r
Homepage https://bioconductor.org/packages/AnnotationDbi/
License -
Maintainer Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Download size 4.41 MB
Installed size 8.34 MB

Alternatives

Package Version Architecture Repository
r-bioc-annotationdbi_1.46.1-1_all.deb 1.46.1 all Debian Main
r-bioc-annotationdbi - - -

Requires

Name Value
r-api-3.5 -
r-api-bioc-3.9 -
r-base-core >= 3.6.1-4
r-bioc-biobase >= 1.17.0
r-bioc-biocgenerics >= 0.29.2
r-bioc-iranges -
r-bioc-s4vectors >= 0.9.25
r-cran-dbi -
r-cran-rsqlite -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package r-bioc-annotationdbi_1.46.1-1_all.deb
Source Package r-bioc-annotationdbi

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install r-bioc-annotationdbi deb package:
    # sudo apt-get install r-bioc-annotationdbi

Files

Path
/usr/lib/R/site-library/AnnotationDbi/DESCRIPTION
/usr/lib/R/site-library/AnnotationDbi/INDEX
/usr/lib/R/site-library/AnnotationDbi/NAMESPACE
/usr/lib/R/site-library/AnnotationDbi/NEWS
/usr/lib/R/site-library/AnnotationDbi/NOTES-Herve
/usr/lib/R/site-library/AnnotationDbi/TODO
/usr/lib/R/site-library/AnnotationDbi/DBschemas/SchemaGuidelines.txt
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/00README.TXT
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/ARABIDOPSISCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/DataTypes.txt
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/FLYCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/FLY_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/GO_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/HUMANCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/HUMAN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/KEGG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/RODENTCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/RODENT_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/YEASTCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_0.9/YEAST_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/00README.TXT
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/ARABIDOPSISCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/BOVINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/BOVINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/CANINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/CANINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/CHICKENCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/CHICKEN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/DataTypes.txt
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/ECOLICHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/ECOLI_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/FLYCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/FLY_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/GO_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/HUMANCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/HUMANCROSSCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/HUMAN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/INPARANOIDDROME_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/INPARANOIDHOMSA_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/INPARANOIDMUSMU_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/INPARANOIDRATNO_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/INPARANOIDSACCE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/KEGG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/MALARIA_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/MOUSECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/MOUSE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/PFAM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/PIGCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/PIG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/RATCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/RAT_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/WORMCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/WORM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/YEASTCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/YEAST_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/ZEBRAFISHCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_1.0/ZEBRAFISH_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/00README.TXT
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ANOPHELES_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ARABIDOPSISCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ARABIDOPSIS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/BOVINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/BOVINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/CANINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/CANINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/CHICKENCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/CHICKEN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/CHIMP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/DataTypes.txt
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ECOLI_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/FLYCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/FLY_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/GO_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/HUMANCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/HUMAN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/INPARANOID_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/KEGG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/MALARIA_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/MOUSECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/MOUSE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/PFAM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/PIG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/RATCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/RAT_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/RHESUS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/WORMCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/WORM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/XENOPUSCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/XENOPUS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/YEASTCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/YEAST_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ZEBRAFISHCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.0/ZEBRAFISH_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/00README.TXT
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ANOPHELES_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ARABIDOPSISCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ARABIDOPSIS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/BOVINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/BOVINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/CANINECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/CANINE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/CHICKENCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/CHICKEN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/CHIMP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/COELICOLOR_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/DataTypes.txt
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ECOLI_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/FLYCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/FLY_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/GO_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/HUMANCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/HUMAN_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/INPARANOID_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/KEGG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/MALARIA_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/MOUSECHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/MOUSE_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/PFAM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/PIG_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/RATCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/RAT_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/RHESUS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/WORMCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/WORM_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/XENOPUSCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/XENOPUS_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/YEASTCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/YEAST_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ZEBRAFISHCHIP_DB.sql
/usr/lib/R/site-library/AnnotationDbi/DBschemas/schemas_2.1/ZEBRAFISH_DB.sql
/usr/lib/R/site-library/AnnotationDbi/Meta/Rd.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/features.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/hsearch.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/links.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/nsInfo.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/package.rds
/usr/lib/R/site-library/AnnotationDbi/Meta/vignette.rds
/usr/lib/R/site-library/AnnotationDbi/R/AnnotationDbi
/usr/lib/R/site-library/AnnotationDbi/R/AnnotationDbi.rdb
/usr/lib/R/site-library/AnnotationDbi/R/AnnotationDbi.rdx
/usr/lib/R/site-library/AnnotationDbi/doc/AnnotationDbi.R
/usr/lib/R/site-library/AnnotationDbi/doc/AnnotationDbi.Rnw
/usr/lib/R/site-library/AnnotationDbi/doc/AnnotationDbi.pdf
/usr/lib/R/site-library/AnnotationDbi/doc/IntroToAnnotationPackages.R
/usr/lib/R/site-library/AnnotationDbi/doc/IntroToAnnotationPackages.Rnw
/usr/lib/R/site-library/AnnotationDbi/doc/IntroToAnnotationPackages.pdf
/usr/lib/R/site-library/AnnotationDbi/doc/index.html
/usr/lib/R/site-library/AnnotationDbi/extdata/HG-U95Av2_probe_tab.gz
/usr/lib/R/site-library/AnnotationDbi/extdata/Inp_species_mapping
/usr/lib/R/site-library/AnnotationDbi/extdata/hcg110_ID
/usr/lib/R/site-library/AnnotationDbi/extdata/hgu95av2_ID
/usr/lib/R/site-library/AnnotationDbi/extdata/manyToOneBlackList.Rda
/usr/lib/R/site-library/AnnotationDbi/extdata/resultTable.Rda
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/DESCRIPTION
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/NAMESPACE
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/R/zzz.R
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/inst/extdata/org.testing.sqlite
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/man/org.TguttataTestingSubset.egBASE.Rd
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/man/org.TguttataTestingSubset.egORGANISM.Rd
/usr/lib/R/site-library/AnnotationDbi/extdata/org.testing.db/man/org.TguttataTestingSubset.eg_dbconn.Rd
/usr/lib/R/site-library/AnnotationDbi/help/AnIndex
/usr/lib/R/site-library/AnnotationDbi/help/AnnotationDbi.rdb
/usr/lib/R/site-library/AnnotationDbi/help/AnnotationDbi.rdx
/usr/lib/R/site-library/AnnotationDbi/help/aliases.rds
/usr/lib/R/site-library/AnnotationDbi/help/paths.rds
/usr/lib/R/site-library/AnnotationDbi/html/00Index.html
/usr/lib/R/site-library/AnnotationDbi/html/R.css
/usr/lib/R/site-library/AnnotationDbi/script/generateMultiCols.R
/usr/lib/R/site-library/AnnotationDbi/unitTests/test_select.R
/usr/share/doc/r-bioc-annotationdbi/README.test
/usr/share/doc/r-bioc-annotationdbi/changelog.Debian.gz
/usr/share/doc/r-bioc-annotationdbi/copyright

Changelog

2019-08-26 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.46.1-1) unstable; urgency=medium
* New upstream version
* Fixed debian/watch for BioConductor
* debhelper-compat 12
* Standards-Version: 4.4.0
2019-07-03 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.46.0-1) unstable; urgency=medium
[ Dylan Aïssi ]
* Add Testsuite: autopkgtest-pkg-r
[ Andreas Tille ]
* New upstream version
* debhelper 12
* Standards-Version: 4.3.0
* Remove trailing whitespace in debian/copyright
* rename debian/tests/control.autodep8 to debian/tests/control
2018-11-09 - Dylan Aïssi <daissi@debian.org>
r-bioc-annotationdbi (1.44.0-1) unstable; urgency=medium
* Team upload.
* New upstream version
* Standards-Version: 4.2.1
2018-07-12 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.1-4) unstable; urgency=medium
* Standards-Version: 4.1.5
2018-06-03 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.1-3) unstable; urgency=medium
* Rebuild for R 3.5 transition
2018-06-03 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.1-2) unstable; urgency=medium
* Rebuild for R 3.5 transition
* dh-update-R to update Build-Depends
2018-05-10 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.1-1) unstable; urgency=medium
* New upstream version
2018-05-05 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.0-3) unstable; urgency=medium
* Fix Maintainer and Vcs-fields
2018-05-05 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.0-2) unstable; urgency=medium
* Fix Maintainer and Vcs-fields
2018-05-03 - Andreas Tille <tille@debian.org>
r-bioc-annotationdbi (1.42.0-1) unstable; urgency=medium
* New upstream version
* debhelper 11
* dh-update-R to update Build-Depends
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* Secure URI in watch file

See Also

Package Description
r-bioc-annotationfilter_1.8.0+dfsg-1_all.deb facilities for filtering Bioconductor annotation resources
r-bioc-annotationhub_2.16.1+dfsg-1_all.deb GNU R client to access AnnotationHub resources
r-bioc-aroma.light_3.14.0-1_all.deb BioConductor methods normalization and visualization of microarray data
r-bioc-biobase_2.44.0-1_amd64.deb base functions for Bioconductor
r-bioc-biocfilecache_1.8.0+dfsg-2_all.deb GNU R management of files across sessions
r-bioc-biocgenerics_0.30.0-3_all.deb generic functions for Bioconductor
r-bioc-biocparallel_1.18.1-1_amd64.deb BioConductor facilities for parallel evaluation
r-bioc-biomart_2.40.5+dfsg-1_all.deb GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
r-bioc-biomformat_1.12.0+dfsg-1_all.deb GNU R interface package for the BIOM file format
r-bioc-biostrings_2.52.0-1_amd64.deb GNU R string objects representing biological sequences
r-bioc-biovizbase_1.32.0-1_amd64.deb GNU R basic graphic utilities for visualization of genomic data
r-bioc-bitseq_1.28.0+dfsg-1_amd64.deb transcript expression inference and analysis for RNA-seq data
r-bioc-bsgenome_1.52.0-1_all.deb BioConductor infrastructure for Biostrings-based genome data packages
r-bioc-cner_1.20.0+dfsg-1_amd64.deb CNE Detection and Visualization
r-bioc-consensusclusterplus_1.48.0-1_all.deb GNU R determining cluster count and membership
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