minia_3.2.0-1_amd64.deb


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Description

minia - short-read biological sequence assembler

Property Value
Distribution Debian Sid
Repository Debian Main amd64
Package filename minia_3.2.0-1_amd64.deb
Package name minia
Package version 3.2.0
Package release 1
Package architecture amd64
Package type deb
Category science
Homepage http://minia.genouest.org/
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 382.60 KB
Installed size 728.00 KB

Alternatives

Package Version Architecture Repository
minia_3.2.0-1_i386.deb 3.2.0 i386 Debian Main
minia - - -

Requires

Name Value
bc -
libc6 >= 2.14
libgatbcore2 >= 1.4.1+git20181225.44d5a44
libgcc1 >= 1:3.0
libhdf5-103 -
libstdc++6 >= 5.2
zlib1g -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package minia_3.2.0-1_amd64.deb
Source Package minia

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install minia deb package:
    # sudo apt-get install minia

Files

Path
/usr/bin/merci
/usr/bin/minia
/usr/share/doc/minia/README.Debian
/usr/share/doc/minia/README.md
/usr/share/doc/minia/README.test
/usr/share/doc/minia/changelog.Debian.gz
/usr/share/doc/minia/copyright
/usr/share/doc/minia/run-unit-test
/usr/share/doc/minia/test/10k_test.sh
/usr/share/doc/minia/test/1seq.fa
/usr/share/doc/minia/test/1seq_90bp.fa
/usr/share/doc/minia/test/1seq_90bp.reads.fq
/usr/share/doc/minia/test/1seq_90bp_circ.fa
/usr/share/doc/minia/test/1seq_90bp_simulate_reads.sh
/usr/share/doc/minia/test/ERR039477.md5
/usr/share/doc/minia/test/ERR039477.md5-gcc47
/usr/share/doc/minia/test/README
/usr/share/doc/minia/test/X.fa
/usr/share/doc/minia/test/X.solution.fa
/usr/share/doc/minia/test/bubble.fa
/usr/share/doc/minia/test/bubble.solution.fa
/usr/share/doc/minia/test/buchnera.fasta.gz
/usr/share/doc/minia/test/buchnera_simulate_reads.sh
/usr/share/doc/minia/test/buchnera_test.sh
/usr/share/doc/minia/test/compare_fasta.py
/usr/share/doc/minia/test/ec.fa.gz
/usr/share/doc/minia/test/ec.solution.fa
/usr/share/doc/minia/test/genome10K.fasta.gz
/usr/share/doc/minia/test/high_abundance.fa.gz
/usr/share/doc/minia/test/read50x_ref10K_e001.fa.gz
/usr/share/doc/minia/test/simple_test.sh
/usr/share/doc/minia/test/test_ERR039477.sh
/usr/share/doc/minia/test/tip.fa
/usr/share/doc/minia/test/tip.solution.fa
/usr/share/man/man1/merci.1.gz
/usr/share/man/man1/minia.1.gz

Changelog

2019-01-25 - Andreas Tille <tille@debian.org>
minia (3.2.0-1) unstable; urgency=medium
* New upstream version
* Add myself as Uploader
* debhelper 12
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.3.0
* Build-Depends: libgatbcore-dev
* Remove trailing whitespace in debian/changelog
* Remove trailing whitespace in debian/control
* Remove trailing whitespace in debian/copyright
* Build-Depends: libboost-dev, libhdf5-dev
* Versioned Build-Depends: libgatbcore-dev (>= 1.4.1+git20181225.44d5a44~)
* Do not set rpath
* Add rudimentary manpages
* Rewrite autopkgtest
2017-12-01 - Nadiya Sitdykova <rovenskasa@gmail.com>
minia (1.6906-2) unstable; urgency=medium
* Team upload.
[Nadiya Sitdykova]
* add autopkgtest test-suite
[ Andreas Tille ]
* debhelper 10
* cme fix dpkg-control
* hardening
* Standards-Version: 4.1.1
* Point watch file to new location to spot new upstream version
2014-11-21 - Olivier Sallou <osallou@debian.org>
minia (1.6906-1) unstable; urgency=medium
* New upstream release
$ d/patches: updates patches to new release
2014-02-21 - Olivier Sallou <osallou@debian.org>
minia (1.6088-1) unstable; urgency=low
* New upstream release
Upstream doc added to source package
2014-01-13 - Olivier Sallou <osallou@debian.org>
minia (1.6067+dfsg-2) unstable; urgency=low
[ Olivier Sallou ]
* d/control: Add info on assembler term (Closes: #735158).
Add missing deps (Closes: #735331).
[ Andreas Tille ]
* d/upstream: Fixed reference
2013-12-21 - Olivier Sallou <osallou@debian.org>
minia (1.6067+dfsg-1) unstable; urgency=medium
* First debian package (Closes: #735158).

See Also

Package Description
miniasm_0.3+dfsg-1_amd64.deb ultrafast de novo assembler for long noisy DNA sequencing reads
minica_1.0-1+b13_amd64.deb super micro binary to issue new CAs
minicom_2.7.1-1+b1_amd64.deb Friendly menu driven serial communication program
minicoredumper-utils_2.0.1-1_amd64.deb minicoredumper utilities
minicoredumper_2.0.1-1_amd64.deb generate minimal and customized core dump files on Linux
minidisc-utils_0.9.16-2_amd64.deb Command line utilities for MiniDisc access
minidjvu_0.8.svn.2010.05.06+dfsg-6_amd64.deb Monochrome DjVu multipage encoder, single page encoder/decoder
minidlna_1.2.1+dfsg-1+b1_amd64.deb lightweight DLNA/UPnP-AV server targeted at embedded systems
minify_2.3.8-1+b10_amd64.deb CLI implementation of the Go minify library package
minilzip_1.11-3_amd64.deb minified, lossless data compressor based on the LZMA algorithm
minimac4_1.0.0-2_amd64.deb Fast Imputation Based on State Space Reduction HMM
minimap2_2.15+dfsg-1_amd64.deb versatile pairwise aligner for genomic and spliced nucleotide sequences
minimap_0.2-4_amd64.deb tool for approximate mapping of long biosequences such as DNA reads
minimodem_0.24-1+b1_amd64.deb general-purpose software audio FSK modem
mininet_2.2.2-4_amd64.deb process-based network emulator
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