metaphlan2_2.7.8-1_all.deb


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Description

metaphlan2 - Metagenomic Phylogenetic Analysis

Property Value
Distribution Debian Sid
Repository Debian Main amd64
Package filename metaphlan2_2.7.8-1_all.deb
Package name metaphlan2
Package version 2.7.8
Package release 1
Package architecture all
Package type deb
Category science
Homepage https://bitbucket.org/biobakery/metaphlan2
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 596.95 KB
Installed size 1.13 MB

Alternatives

Package Version Architecture Repository
metaphlan2_2.7.8-1_all.deb 2.7.8 all Debian Main
metaphlan2 - - -

Requires

Name Value
bowtie2 -
metaphlan2-data -
python-biom-format -
python-msgpack -
python-pandas -
python:any -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package metaphlan2_2.7.8-1_all.deb
Source Package metaphlan2

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install metaphlan2 deb package:
    # sudo apt-get install metaphlan2

Files

Path
/usr/bin/metaphlan2
/usr/bin/strainphlan
/usr/share/doc/metaphlan2/README.html
/usr/share/doc/metaphlan2/changelog.Debian.gz
/usr/share/doc/metaphlan2/changelog.gz
/usr/share/doc/metaphlan2/copyright
/usr/share/doc/metaphlan2/images/1574126761-RAxML_bestTree.s__Bacteroides_caccae.tree.metadata.png
/usr/share/doc/metaphlan2/images/1771497600-snp_distance.png
/usr/share/doc/metaphlan2/images/476974413-tree_alignment.png
/usr/share/doc/metaphlan2/images/get-pngs
/usr/share/man/man1/metaphlan2.1.gz
/usr/share/man/man1/strainphlan.1.gz
/usr/share/metaphlan2/__init__.py
/usr/share/metaphlan2/_metaphlan2.py
/usr/share/metaphlan2/metaphlan2.py
/usr/share/metaphlan2/plugin_setup.py
/usr/share/metaphlan2/strainphlan.py
/usr/share/metaphlan2/utils/extract_markers.py
/usr/share/metaphlan2/utils/merge_metaphlan_tables.py
/usr/share/metaphlan2/utils/metaphlan2krona.py
/usr/share/metaphlan2/utils/metaphlan_hclust_heatmap.py
/usr/share/metaphlan2/utils/plot_bug.py
/usr/share/metaphlan2/utils/read_fastx.py
/usr/share/metaphlan2/utils/species2genomes.txt
/usr/share/python/runtime.d/metaphlan2.rtupdate

Changelog

2018-09-17 - Andreas Tille <tille@debian.org>
metaphlan2 (2.7.8-1) unstable; urgency=medium
* Drop libjs-twitter-bootstrap dependency which is not needed any more
Closes: #908426
* New upstream version
* Standards-Version: 4.2.1
* d/watch: Uversionmangle to avoid missinterpretation of nano version
number that is not separated by '.'
2018-05-28 - Andreas Tille <tille@debian.org>
metaphlan2 (2.7.6-1) unstable; urgency=medium
[ Andreas Tille ]
* New upstream version
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
* Avoid privacy breach by referencing remote files from README.html
[ Tony Travis ]
* Compile with Python2 despite _metaphlan2.py is using Python3 syntax
2018-02-16 - Andreas Tille <tille@debian.org>
metaphlan2 (2.7.5-1) unstable; urgency=medium
* New upstream version (no data shiped with this archive any more)
* Standards-Version: 4.1.3
* debhelper 11
* db_v20/mpa_v20_m200.pkl was removed from upstream source so we can not
install this file
2016-12-11 - Andreas Tille <tille@debian.org>
metaphlan2 (2.6.0+ds-2) unstable; urgency=medium
* Fix location of marker information file
Closes: #847670
* debhelper 10
* d/watch: version=4
2016-09-17 - Andreas Tille <tille@debian.org>
metaphlan2 (2.6.0+ds-1) unstable; urgency=medium
* Initial release (Closes: #838083)
2016-05-23 - Andreas Tille <tille@debian.org>
metaphlan2 (2.5.0-0~ubuntu14.04~ppa1) trusty; urgency=medium
* Pre-release to Debian Med PPA

See Also

Package Description
metapixel_1.0.2-7.4+b1_amd64.deb generator for photomosaics
metar_20190227.1-1_amd64.deb utility to download/decode METAR reports
metastore_1.1.2-2_amd64.deb Store and restore metadata from a filesystem
metastudent-data-2_1.0.0-4_all.deb predictor of Gene Ontology terms from protein sequence - data #2
metastudent-data_2.0.1-4_all.deb predictor of Gene Ontology terms from protein sequence - data files
metastudent_2.0.1-6_all.deb predictor of Gene Ontology terms from protein sequence
metche_1.2.4-1_all.deb configuration monitor to ease collective administration
meteo-qt-l10n_1.0.0-1_all.deb Application to display weather information (translations)
meteo-qt_1.0.0-1_amd64.deb Application to display weather information
meterbridge_0.9.2-13_amd64.deb Collection of Audio meters for the JACK audio server
meterec_0.9.2~ds0-2+b2_amd64.deb minimalistic multi track recorder
metis_5.1.0.dfsg-5+b2_amd64.deb Serial Graph Partitioning and Fill-reducing Matrix Ordering. Binaries
metview-data_5.3.0-2_all.deb Data needed for the Metview data analysis environment
metview_5.3.0-2_amd64.deb Interactive data visualization and analysis environment,
mew-beta-bin_7.0.50~6.8+0.20190228-1_amd64.deb external commands for Mew (development version)
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