hilive - realtime alignment of Illumina reads

Property Value
Distribution Debian 9 (Stretch)
Repository Debian Main i386
Package name hilive
Package version 0.3
Package release 2
Package architecture i386
Package type deb
Installed size 1.30 KB
Download size 299.67 KB
Official Mirror ftp.br.debian.org
HiLive is a read mapping tool that maps Illumina HiSeq (or comparable)
reads to a reference genome right in the moment when they are produced.
This means, read mapping is finished as soon as the sequencer is
finished generating the data.


Package Version Architecture Repository
hilive_0.3-2_amd64.deb 0.3 amd64 Debian Main
hilive - - -


Name Value
libc6 >= 2.4
libgcc1 >= 1:4.2
libhts1 >= 1.0
liblz4-1 >= 0.0~r113
libstdc++6 >= 6
zlib1g >= 1:


Type URL
Binary Package hilive_0.3-2_i386.deb
Source Package hilive

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install hilive deb package:
    # sudo apt-get install hilive




2017-01-28 - Andreas Tille <tille@debian.org>
hilive (0.3-2) unstable; urgency=medium
* Adapt path to seqan cmake files
Closes: #852850
2016-12-06 - Andreas Tille <tille@debian.org>
hilive (0.3-1) unstable; urgency=medium
[Andreas Tille]
* New upstream location with proper tagging, Closes: #833392
* debhelper 10
[Gert Wollny] 
* d/control: Add libseqan2-dev  and libhts-dev as build dependency 
* d/patches/use_...: correct path to cmake modules for FindSeQan
an remove forced CXXFLAGS 
2016-07-30 - Andreas Tille <tille@debian.org>
hilive (0.0+20150926-1) unstable; urgency=medium
* Initial release (Closes: #832950)

See Also

Package Description
hime-anthy_0.9.10+git20150916+dfsg1-8+b1_i386.deb support library to use Anthy in HIME
hime-chewing_0.9.10+git20150916+dfsg1-8+b1_i386.deb support library to use Chewing in HIME
hime-data_0.9.10+git20150916+dfsg1-8_all.deb icons, locales and scripts for HIME
hime-gtk2-immodule_0.9.10+git20150916+dfsg1-8+b1_i386.deb GTK2 input method module with HIME as backend
hime-gtk3-immodule_0.9.10+git20150916+dfsg1-8+b1_i386.deb GTK3 input method module with HIME as backend
hime-qt4-immodule_0.9.10+git20150916+dfsg1-8+b1_i386.deb Qt4 input method module with HIME as backend
hime-qt5-immodule_0.9.10+git20150916+dfsg1-8+b1_i386.deb Qt5 input method module with HIME as backend
hime-tables_0.9.10+git20150916+dfsg1-8+b1_i386.deb input method tables for HIME
hime_0.9.10+git20150916+dfsg1-8+b1_i386.deb GTK+ based input method for Chinese users
hindsight_0.12.7-1_i386.deb Light weight data processing infrastructure
hitch_1.4.4-1_i386.deb scalable TLS proxy
hitori_3.22.0-1_i386.deb logic puzzle game similar to sudoku
hledger-interest_1.5-1_i386.deb interest computing for (h)ledger
hledger-ui_1.0.2-1_i386.deb curses-style user interface for the hledger accounting tool
hledger-web_1.0.1-1_i386.deb web interface for the hledger accounting tool