libarb-dev_6.0.2-1+deb8u1_amd64.deb


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Description

libarb-dev - Graphical suite for phylogenetic sequence analysis (development files)

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Nonfree amd64
Package filename libarb-dev_6.0.2-1+deb8u1_amd64.deb
Package name libarb-dev
Package version 6.0.2
Package release 1+deb8u1
Package architecture amd64
Package type deb
Category devel::library non-free/libdevel role::devel-lib
Homepage http://www.arb-home.de/
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 392.52 KB
Installed size 2.09 MB
The ARB software is a graphically oriented package comprising various tools
for sequence database handling and data analysis. A central database of
processed (aligned) sequences and any type of additional data linked to the
respective sequence entries is structured according to phylogeny or other
user defined criteria.
The ARB project (latin, "arbor"=tree) is a joint initiative of the Lehrstuhl
fuer Mikrobiologie http://www.mikro.biologie.tu-muenchen.de/ and the
Lehrstuhl fuer Rechnertechnik und Rechnerorganisation
http://wwwbode.informatik.tu-muenchen.de/ of the Technical University
of Munich.
This package contains headers and static libs needed to link against libARBDB.

Alternatives

Package Version Architecture Repository
libarb-dev_6.0.2-1+deb8u1_i386.deb 6.0.2 i386 Debian Nonfree
libarb-dev - - -

Requires

Name Value
libarb = 6.0.2-1+deb8u1

Download

Type URL
Mirror ftp.br.debian.org
Binary Package libarb-dev_6.0.2-1+deb8u1_amd64.deb
Source Package arb

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libarb-dev deb package:
    # sudo apt-get install libarb-dev

Files

Path
/usr/include/arb/AP_Tree.hxx
/usr/include/arb/AP_codon_table.hxx
/usr/include/arb/AP_filter.hxx
/usr/include/arb/AP_matrix.hxx
/usr/include/arb/AP_pro_a_nucs.hxx
/usr/include/arb/AP_seq_dna.hxx
/usr/include/arb/AP_seq_protein.hxx
/usr/include/arb/AP_seq_simple_pro.hxx
/usr/include/arb/AP_sequence.hxx
/usr/include/arb/ARB_Tree.hxx
/usr/include/arb/AW_helix.hxx
/usr/include/arb/AW_rename.hxx
/usr/include/arb/AliView.hxx
/usr/include/arb/BI_basepos.hxx
/usr/include/arb/BI_helix.hxx
/usr/include/arb/BufferedFileReader.h
/usr/include/arb/CT_ctree.hxx
/usr/include/arb/ChecksumCollector.h
/usr/include/arb/ColumnStat.hxx
/usr/include/arb/EXP.hxx
/usr/include/arb/FileContent.h
/usr/include/arb/GEN.hxx
/usr/include/arb/GenomeImport.h
/usr/include/arb/Location.h
/usr/include/arb/MultiFileReader.h
/usr/include/arb/PT_com.h
/usr/include/arb/PT_global_defs.h
/usr/include/arb/PT_server.h
/usr/include/arb/PT_server_prototypes.h
/usr/include/arb/RangeList.h
/usr/include/arb/RegExpr.hxx
/usr/include/arb/RootedTree.h
/usr/include/arb/SigHandler.h
/usr/include/arb/SuppressOutput.h
/usr/include/arb/Translate.hxx
/usr/include/arb/TreeAdmin.h
/usr/include/arb/TreeCallbacks.hxx
/usr/include/arb/TreeDisplay.hxx
/usr/include/arb/TreeRead.h
/usr/include/arb/TreeWrite.h
/usr/include/arb/adGene.h
/usr/include/arb/ad_cb.h
/usr/include/arb/ad_cb_prot.h
/usr/include/arb/ad_config.h
/usr/include/arb/ad_p_prot.h
/usr/include/arb/ad_prot.h
/usr/include/arb/ad_remote.h
/usr/include/arb/ad_t_prot.h
/usr/include/arb/adperl.h
/usr/include/arb/aisc_func_types.h
/usr/include/arb/aisc_global.h
/usr/include/arb/arb_algo.h
/usr/include/arb/arb_assert.h
/usr/include/arb/arb_backtrace.h
/usr/include/arb/arb_build.h
/usr/include/arb/arb_core.h
/usr/include/arb/arb_cs.h
/usr/include/arb/arb_debug.h
/usr/include/arb/arb_defs.h
/usr/include/arb/arb_diff.h
/usr/include/arb/arb_early_check.h
/usr/include/arb/arb_error.h
/usr/include/arb/arb_file.h
/usr/include/arb/arb_forward_list.h
/usr/include/arb/arb_global_defs.h
/usr/include/arb/arb_handlers.h
/usr/include/arb/arb_match.h
/usr/include/arb/arb_misc.h
/usr/include/arb/arb_msg.h
/usr/include/arb/arb_msg_fwd.h
/usr/include/arb/arb_pathlen.h
/usr/include/arb/arb_progress.h
/usr/include/arb/arb_signal.h
/usr/include/arb/arb_simple_assert.h
/usr/include/arb/arb_sleep.h
/usr/include/arb/arb_sort.h
/usr/include/arb/arb_stdstr.h
/usr/include/arb/arb_str.h
/usr/include/arb/arb_strarray.h
/usr/include/arb/arb_strbuf.h
/usr/include/arb/arb_string.h
/usr/include/arb/arb_unit_test.h
/usr/include/arb/arb_unordered_map.h
/usr/include/arb/arb_version.h
/usr/include/arb/arbdb.h
/usr/include/arb/arbdb_base.h
/usr/include/arb/arbdbt.h
/usr/include/arb/arbtools.h
/usr/include/arb/attributes.h
/usr/include/arb/aw_advice.hxx
/usr/include/arb/aw_awar.hxx
/usr/include/arb/aw_awar_defs.hxx
/usr/include/arb/aw_awars.hxx
/usr/include/arb/aw_base.hxx
/usr/include/arb/aw_color_groups.hxx
/usr/include/arb/aw_device.hxx
/usr/include/arb/aw_device_click.hxx
/usr/include/arb/aw_edit.hxx
/usr/include/arb/aw_file.hxx
/usr/include/arb/aw_font_group.hxx
/usr/include/arb/aw_global.hxx
/usr/include/arb/aw_global_awars.hxx
/usr/include/arb/aw_keysym.hxx
/usr/include/arb/aw_msg.hxx
/usr/include/arb/aw_position.hxx
/usr/include/arb/aw_preset.hxx
/usr/include/arb/aw_question.hxx
/usr/include/arb/aw_root.hxx
/usr/include/arb/aw_scalar.hxx
/usr/include/arb/aw_select.hxx
/usr/include/arb/aw_window.hxx
/usr/include/arb/aw_window_Xm_interface.hxx
/usr/include/arb/awt.hxx
/usr/include/arb/awt_TreeAwars.hxx
/usr/include/arb/awt_asciiprint.hxx
/usr/include/arb/awt_attributes.hxx
/usr/include/arb/awt_canvas.hxx
/usr/include/arb/awt_config_manager.hxx
/usr/include/arb/awt_filter.hxx
/usr/include/arb/awt_hotkeys.hxx
/usr/include/arb/awt_input_mask.hxx
/usr/include/arb/awt_map_key.hxx
/usr/include/arb/awt_modules.hxx
/usr/include/arb/awt_sel_boxes.hxx
/usr/include/arb/awt_seq_colors.hxx
/usr/include/arb/awt_www.hxx
/usr/include/arb/awtc_next_neighbours.hxx
/usr/include/arb/awtc_submission.hxx
/usr/include/arb/awti_export.hxx
/usr/include/arb/awti_import.hxx
/usr/include/arb/awtlocal.hxx
/usr/include/arb/bugex.h
/usr/include/arb/bytestring.h
/usr/include/arb/cache.h
/usr/include/arb/cb.h
/usr/include/arb/cb_base.h
/usr/include/arb/cbtypes.h
/usr/include/arb/client.h
/usr/include/arb/client_privat.h
/usr/include/arb/client_types.h
/usr/include/arb/command_output.h
/usr/include/arb/config_parser.h
/usr/include/arb/cxxforward.h
/usr/include/arb/db_query.h
/usr/include/arb/db_scanner.hxx
/usr/include/arb/dbitem_set.h
/usr/include/arb/dbui.h
/usr/include/arb/dist.hxx
/usr/include/arb/downcast.h
/usr/include/arb/dupstr.h
/usr/include/arb/ed4_extern.hxx
/usr/include/arb/ed4_plugins.hxx
/usr/include/arb/fast_aligner.hxx
/usr/include/arb/gccver.h
/usr/include/arb/gde.hxx
/usr/include/arb/gui_aliview.hxx
/usr/include/arb/info_window.h
/usr/include/arb/insdel.h
/usr/include/arb/island_hopping.h
/usr/include/arb/item_sel_list.h
/usr/include/arb/items.h
/usr/include/arb/iupac.h
/usr/include/arb/macros.hxx
/usr/include/arb/malloc.h
/usr/include/arb/mg_merge.hxx
/usr/include/arb/mode_text.h
/usr/include/arb/multi_probe.hxx
/usr/include/arb/names_client.h
/usr/include/arb/names_prototypes.h
/usr/include/arb/names_server.h
/usr/include/arb/nds.h
/usr/include/arb/neighbourjoin.hxx
/usr/include/arb/output.h
/usr/include/arb/perf_timer.h
/usr/include/arb/pos_range.h
/usr/include/arb/primer_design.hxx
/usr/include/arb/probe_design.hxx
/usr/include/arb/ptclean.h
/usr/include/arb/refentries.h
/usr/include/arb/rna3d_extern.hxx
/usr/include/arb/rootAsWin.h
/usr/include/arb/secedit_extern.hxx
/usr/include/arb/seq_quality.h
/usr/include/arb/seqio.hxx
/usr/include/arb/server.h
/usr/include/arb/servercntrl.h
/usr/include/arb/smartptr.h
/usr/include/arb/st_window.hxx
/usr/include/arb/static_assert.h
/usr/include/arb/struct_man.h
/usr/include/arb/svn_revision.h
/usr/include/arb/test_global.h
/usr/include/arb/test_helpers.h
/usr/include/arb/test_unit.h
/usr/include/arb/ttypes.h
/usr/include/arb/ut_valgrinded.h
/usr/include/arb/valgrind.h
/usr/include/arb/xml.hxx
/usr/include/arb/GL/aw_window_ogl.hxx
/usr/include/arb/GL/glpng.h
/usr/lib/arb/INCLUDE
/usr/lib/arb/NAMES_COM/client.a
/usr/lib/arb/NAMES_COM/common.a
/usr/lib/arb/NAMES_COM/server.a
/usr/lib/arb/PROBE_COM/client.a
/usr/lib/arb/PROBE_COM/common.a
/usr/lib/arb/PROBE_COM/server.a
/usr/lib/arb/SL/ALIVIEW/ALIVIEW.a
/usr/lib/arb/SL/AP_TREE/AP_TREE.a
/usr/lib/arb/SL/ARB_TREE/ARB_TREE.a
/usr/lib/arb/SL/AW_HELIX/AW_HELIX.a
/usr/lib/arb/SL/AW_NAME/AW_NAME.a
/usr/lib/arb/SL/DB_QUERY/DB_QUERY.a
/usr/lib/arb/SL/DB_SCANNER/DB_SCANNER.a
/usr/lib/arb/SL/DB_UI/DB_UI.a
/usr/lib/arb/SL/FAST_ALIGNER/FAST_ALIGNER.a
/usr/lib/arb/SL/FILTER/FILTER.a
/usr/lib/arb/SL/GUI_ALIVIEW/GUI_ALIVIEW.a
/usr/lib/arb/SL/HELIX/HELIX.a
/usr/lib/arb/SL/INSDEL/INSDEL.a
/usr/lib/arb/SL/ITEMS/ITEMS.a
/usr/lib/arb/SL/LOCATION/LOCATION.a
/usr/lib/arb/SL/MACROS/MACROS.a
/usr/lib/arb/SL/MATRIX/MATRIX.a
/usr/lib/arb/SL/NDS/NDS.a
/usr/lib/arb/SL/NEIGHBOURJOIN/NEIGHBOURJOIN.a
/usr/lib/arb/SL/PRONUC/PRONUC.a
/usr/lib/arb/SL/PTCLEAN/PTCLEAN.a
/usr/lib/arb/SL/REFENTRIES/REFENTRIES.a
/usr/lib/arb/SL/REGEXPR/REGEXPR.a
/usr/lib/arb/SL/ROOTED_TREE/ROOTED_TREE.a
/usr/lib/arb/SL/SEQIO/SEQIO.a
/usr/lib/arb/SL/SEQUENCE/SEQUENCE.a
/usr/lib/arb/SL/TRANSLATE/TRANSLATE.a
/usr/lib/arb/SL/TREEDISP/TREEDISP.a
/usr/lib/arb/SL/TREE_ADMIN/TREE_ADMIN.a
/usr/lib/arb/SL/TREE_READ/TREE_READ.a
/usr/lib/arb/SL/TREE_WRITE/TREE_WRITE.a
/usr/share/doc/libarb-dev/changelog.Debian.gz
/usr/share/doc/libarb-dev/copyright

Changelog

2015-12-10 - Andreas Tille <tille@debian.org>
arb (6.0.2-1+deb8u1) jessie; urgency=medium
* Skip compiler version check at all
Closes: #793187
2014-09-02 - Elmar Pruesse <elmar@pruesse.net>
arb (6.0.2-1) unstable; urgency=medium
[ Andreas Tille ]
* New upstream version
Closes: #741890
* debian/upstream -> debian/upstream/metadata
* debian/control:
- Build-Depends: added libglib2.0-dev
- Depends: added mafft, mrbayes
* debian/rules
- Add explicite --remove-section=.comment option to manual strip call
* cme fix dpkg-control
* arb-common.dirs: Do not create unneeded lintian dir
* Add turkish debconf translation (thanks for the patch to Mert Dirik
<mertdirik@gmail.com>)
Closes: #757497
[ Elmar Pruesse ]
* patches removed:
- 10_config.makefiles.patch,
80_no_GL.patch
removed in favor of creating file from config.makefile.template via 
sed in debian/control
- 20_Makefile_main.patch
merged upstream
- 21_Makefiles.patch
no longer needed
- 30_tmpfile_CVE-2008-5378.patch: 
merged upstream
- 50_fix_gcc-4.8.patch:
merged upstream
- 40_add_libGLU.patch:
libGLU not needed for arb_ntree)
- 60_use_debian_packaged_raxml.patch:
merged upstream
- 70_hardening.patch
merged upstream
- 72_add_math_lib_to_linker.patch
does not appear to be needed
* patches added:
- 10_upstream_r12793__show_db_load_progress:
backported patch showing progress while ARB is loading a database
(needed as indicator/splash screen while ARB is launching)
- 20_upstream_r12794__socket_permissions:
backported security fix
- 30_upstream_r12814__desktop_keywords:
backported add keywords to desktop (fixes lintian warning)
- 40_upstream_r12815__lintian_spelling:
backported fix for lintian reported spelling errors
- 50_private_nameservers
change configuration to put nameservers into users home dirs
(avoids need for shared writeable directory)
- 60_use_debian_phyml
use phyml from debian package for both interfaces in ARB
* debian/rules:
- create config.makefile from override_dh_configure target
- use "make tarfile" in override_dh_install
- remove extra cleaning not needed for ARB 6
- use "dh_install --list-missing" to avoid missing files
- added override_dh_fixperms target
* debian/control:
- added libarb-dev package
- Depends: added phyml, xdg-utils
- Suggests: removed phyml
- fix lintian duplicate-short-description (new descriptions)
* debian/*.install:
- "unrolled" confusing globbing to select files
- pick files from debian/tmp
- moved all config files to /etc/arb
* debian/arb-common.templates: updated
* scripts:
- removed arb-add-pt-server
- launch-wrapper: 
- only add demo.arb to newly created $ARBUSERDATA
- pass commandline arguments through bin/arb wrapper
- preinst: removing old PT server index files on upgrade from 5.5*
- postinst: set setgid on shared PT dir
* rewrote arb.1 manfile
* added file icon for ARB databases
* using upstream arb_tcp.dat
2013-12-04 - Andreas Tille <tille@debian.org>
arb (5.5-5) unstable; urgency=low
* build-depend on libtiff-dev instead of libtiff4-dev (thanks for the
patch to Logan Rosen <logan@ubuntu.com>)
Closes: #729769
* cme fix dpkg-control
* cme fix dpkg-copyright
* canonical Vcs fields
* debian/patches/hardening.patch: Propagate hardening options
2013-06-28 - Andreas Tille <tille@debian.org>
arb (5.5-4) unstable; urgency=low
* Build-Depends: libglew-dev instead of libglew1.5-dev
Closes: #714327

See Also

Package Description
libarb_6.0.2-1+deb8u1_amd64.deb Graphical suite for phylogenetic sequence analysis (libraries)
libblimps3-dev_3.9-1_amd64.deb blocks database improved searcher library (development)
libblimps3_3.9-1_amd64.deb blocks database improved searcher library
libcg_3.1.0013-2_amd64.deb Nvidia Cg core runtime library
libcggl_3.1.0013-2_amd64.deb Nvidia Cg Opengl runtime library
libclamunrar7_0.99-0+deb8u3_amd64.deb anti-virus utility for Unix - unrar support
libcolt-java-doc_1.2.0+dfsg-2_all.deb scalable scientific and technical computing in Java (doc)
libcolt-java_1.2.0+dfsg-2_all.deb scalable scientific and technical computing in Java
libcore++-demo_1.7-12_all.deb C/C++ library for robust computation (demos)
libcore++-dev_1.7-12_amd64.deb C/C++ library for robust computation (development files)
libcore++-doc_1.7-12_all.deb C/C++ library for robust computation (documentation)
libcore++1c2_1.7-12_amd64.deb C/C++ library for robust computation
libcublas6.0_6.0.37-5_amd64.deb NVIDIA cuBLAS Library
libcuda1_340.106-1_amd64.deb NVIDIA CUDA Driver Library
libcudart6.0_6.0.37-5_amd64.deb NVIDIA CUDA Runtime Library
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