massxpert_3.4.1-1_amd64.deb


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Description

massxpert - linear polymer mass spectrometry software

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name massxpert
Package version 3.4.1
Package release 1
Package architecture amd64
Package type deb
Installed size 3.38 KB
Download size 1.12 MB
Official Mirror ftp.br.debian.org
massXpert is a program to simulate and analyse mass spectrometric
data obtained on linear (bio-)polymers. It is the successor of GNU
polyxmass.
Four modules allow:
- making brand new polymer chemistry definitions;
- using the definitions to perform easy calculations in a desktop
calculator-like manner;
- performing sophisticated polymer sequence editing and simulations;
- perform m/z list comparisons;
Chemical simulations encompass cleavage (either chemical or
enzymatic), gas-phase fragmentations, chemical modification of any
monomer in the polymer sequence, cross-linking of monomers in the
sequence, arbitrary mass searches, calculation of the isotopic
pattern...

Alternatives

Package Version Architecture Repository
massxpert_3.4.1-1_i386.deb 3.4.1 i386 Debian Main
massxpert - - -

Requires

Name Value
libc6 >= 2.14
libgcc1 >= 1:4.1.1
libqt4-svg >= 4:4.5.3
libqt4-xml >= 4:4.5.3
libqtcore4 >= 4:4.8.0
libqtgui4 >= 4:4.8.0
libstdc++6 >= 4.1.1
massxpert-data << 3.4.1A~
massxpert-data >= 3.4.1

Conflicts

Name Value
massxpert-bin -

Replaces

Name Value
massxpert-bin -

Download

Type URL
Binary Package massxpert_3.4.1-1_amd64.deb
Source Package massxpert

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install massxpert deb package:
    # sudo apt-get install massxpert

Files

Path
/usr/bin/massxpert
/usr/lib/massxpert/plugins/libmassListSorterPlugin.so
/usr/lib/massxpert/plugins/libnumeralsLocaleConverterPlugin.so
/usr/lib/massxpert/plugins/libseqToolsPlugin.so
/usr/share/applications/massxpert.desktop
/usr/share/doc/massxpert/changelog.Debian.gz
/usr/share/doc/massxpert/copyright
/usr/share/man/man1/massxpert.1.gz
/usr/share/massxpert/locales/massxpert_fr.qm
/usr/share/menu/massxpert
/usr/share/pixmaps/massxpert-icon-32.xpm

Changelog

2013-07-01 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.4.1-1) unstable; urgency=low
* This new package happens to close a bug which needed no fixes
(Closes: #701319)
* debian/control: set Standards-Version: 3.9.4
* debian/control: set standard vcs uri's
* debian/compat: set value 9 (hardening stuff automagically handled)
* debian/rules: update the hardening stuff according to using v9 of
debhelper
* debian/control: set debhelper dependency version to 9.20130630
* massxpert.desktop: Icon=massxpert-icon-32 (no extension for filename)
* massxpert.desktop: Categories=Science (one categ. only)
2012-12-25 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.4.0-1) unstable; urgency=low
* New upstream release:
- Implemented the primary selection clipboard copy in the sequence
editor window;
- Implemented feature that allows one to enter a coordinates string in
the sequence editor window so as to select a specific sequence or make
a multi-region selection or make a multi-selection region.
- Refactored the mz lab GUI so as to greatly simplify its use.
- Update of the french translation.
2012-12-04 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.3.0-1) unstable; urgency=low
* New upstream release implementing new ways to import mass data in the
m/z lists of the mzLab. Updated the documentation.
2012-10-17 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.4-1) unstable; urgency=low
* debian/control: add Build-Depends: dpkg-dev (>= 1.16.1~) as lintian
complained about transitive dependencies that should be made explicit.
* Added new modifications in the protein-1-letter chemistry definition.
2012-06-08 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.3-1) unstable; urgency=low
* debian/rules: setting DPKG_EXPORT_BUILDFLAGS=1 to implement the Debian
hardening guidelines.
* Modification in the dna.xml file to better document the photocleavable 
biotin modification
2012-05-14 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.2-1) unstable; urgency=low
* Upstream release:
- Fix warning messages from gcc, complaining about set variable
values, but unused variables. Replaced corresponding Q_ASSERT() calls
to qFatal() ones.
2012-05-10 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.1-1) unstable; urgency=low
* Upstream release:
- fix a bug in the definition of the protein chemical modifications 
TNB and  DTNB;
* Add debian/upstream to document a reference to a paper describing this
software;
* Fix problem with failing symbolic link between the massxpert and -dbg
doc directories (lintian W binaries-have-file-conflict);
* Bump-up Standards Version number to 3.9.3 from 3.9.1.
2011-11-24 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.0-2) unstable; urgency=low
* debian/control: configure packaging for debug symbols (new
massxpert-dbg binary package added).
2011-10-22 - Filippo Rusconi <lopippo@debian.org>
massxpert (3.2.0-1) unstable; urgency=low
* Upstream release:
- Added feature to simulate fragmentations of oligomers that contain
cross-links. 
- Updated the user manual to document the new feature.

See Also

Package Description
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matanza_0.13+ds1-5_amd64.deb Space ascii war game
matchbox-common_0.9.1-5_all.deb common files for Matchbox Project applications
matchbox-desktop_2.0-4_amd64.deb desktop application launcher for resource-limited systems
matchbox-keyboard-im_0.1+svn20080916-10_amd64.deb on-screen keyboard
matchbox-keyboard_0.1+svn20080916-10_amd64.deb on-screen keyboard
matchbox-panel-manager_0.1-6_amd64.deb panel manager for matchbox-panel
matchbox-panel_0.9.3-8.1_amd64.deb desktop panel for resource-limited systems
matchbox-themes-extra_0.3-3_all.deb extra themes for matchbox-window-manager
matchbox-window-manager_1.2-osso21-1+b1_amd64.deb window manager for resource-limited systems
matchbox_5_all.deb base X environment for resource-limited systems
mate-applets-common_1.8.1+dfsg1-3_all.deb Various applets for the MATE panel (common files)
mate-applets_1.8.1+dfsg1-3_amd64.deb Various applets for the MATE panel
mate-backgrounds_1.8.0-2_all.deb Set of backgrounds packaged with the MATE Desktop Environment
mate-common_1.8.0-2_all.deb common scripts and macros to develop with MATE
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