lutefisk - de novo interpretation of peptide CID spectra

Distribution: Debian 8 (Jessie)
Repository: Debian Main amd64
Package name: lutefisk
Package version: 1.0.7+dfsg
Package release: 4
Package architecture: amd64
Package type: deb
Installed size: 282 B
Download size: 114.61 KB
Official Mirror:
Lutefisk performs a de novo interpreation of collision-induced decay (CID) spectra, providing the user with a file containing all the possible sequence candidates corresponding to the CID data.




    Source package: lutefisk

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install lutefisk deb package:
      # sudo apt-get install lutefisk


    • /usr/bin/lutefisk
    • /usr/share/doc/lutefisk/changelog.Debian.gz
    • /usr/share/doc/lutefisk/changelog.gz
    • /usr/share/doc/lutefisk/copyright
    • /usr/share/doc/lutefisk/examples/Lutefisk.lcq_params.gz
    • /usr/share/doc/lutefisk/examples/Lutefisk.qtof_params.gz
    • /usr/share/doc/lutefisk/examples/Qtof_ELVISLIVESK.dta.gz
    • /usr/share/doc/lutefisk/examples/Qtof_ELVISLIVESK.lut
    • /usr/share/doc/lutefisk/examples/database.sequence
    • /usr/share/lutefisk/Lutefisk.details
    • /usr/share/lutefisk/Lutefisk.residues
    • /usr/share/man/man1/lutefisk.1.gz


    2014-08-18 - Filippo Rusconi <> lutefisk (1.0.7+dfsg-4) unstable; urgency=medium * mv upstream upstream/metadata * Switch to more concise debhelper rules syntax.

    2014-07-01 - Filippo Rusconi <> lutefisk (1.0.7+dfsg-3) unstable; urgency=low * Force new version so that uploading will finally work. This time, upload after dpkg-buildpackage -sa, so that the orig.tar.gz is uploaded along with the other files. Indeed, the previous upload was rejected (can't really understand why): lutefisk_1.0.7+dfsg-2.dsc: Invalid size hash for lutefisk_1.0.7+dfsg.orig.tar.gz: According to the control file the size hash should be 270827, but lutefisk_1.0.7+dfsg.orig.tar.gz has 268306. If you did not include lutefisk_1.0.7+dfsg.orig.tar.gz in you upload, a different version might already be known to the archive software. * This release should still close that bug (Closes: #753226).

    2014-06-30 - Filippo Rusconi <> lutefisk (1.0.7+dfsg-2) unstable; urgency=low * Fix the patches which were lacking a newline between the header and the diffs. Thanks to Juhani Numminen <> for submitting a patch (Closes: #753226). * Set the VCS url to the canonical format. * debian/rules: add a target to get the original source. * Update Standards-Version: to 3.9.5.

    2013-06-04 - Filippo Rusconi <> lutefisk (1.0.7+dfsg-1) unstable; urgency=low * new upstream version; * applied patches as for previous version, but this time using the dquilt setup. For that set the source format to 3.0 (quilt); * debian/control: Standards-Version: 3.9.4 and set address to; * set the basis for hardening stuff but commented out because would require a lot of work. I let that for another release; * set dpkg-dev (>= to build depends for hardening stuff; * debian/watch: new version of watch file from kind contribution of Daniel Leidert <>; * debian/ script to get the original source, clean it and make an orig tarball. Kind contribution from Daniel; Leidert. (Closes: #675830; sorry Daniel that I somehow skipped the bug report for so long); * change debian/ so that awful doc file name is moved to index.html; * debian/rules: remove the renaming of the doc file since performed at orig tarball constitution.

    2009-12-09 - Filippo Rusconi <> lutefisk (1.0.5a.cleaned-1) unstable; urgency=low * Initial release (Closes: #527141); * Removed file windoze/lutefisk.exe that was shipped in the upstream tarball; * Fixed glitches in the upstream source that had gcc emit warning (#include <math.h> in two files and and replace 'NULL' with '\x0' to test end of array in one file); * Move the main HTML documentation file (space-ridden filename) to index.html; * Look for default files in /usr/share/lutefisk/, not current directory. * Display usage help when no argument given. * Protect against too long filenames (and raise the limit). * Sponsored upload done by Lionel Elie Mamane <>.