ltrsift_1.0.2-1_amd64.deb


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Description

ltrsift - postprocessing and classification of LTR retrotransposons

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name ltrsift
Package version 1.0.2
Package release 1
Package architecture amd64
Package type deb
Installed size 408 B
Download size 123.99 KB
Official Mirror ftp.br.debian.org
LTRsift is a graphical desktop tool for semi-automatic postprocessing of de
novo predicted LTR retrotransposon annotations, such as the ones generated by
LTRharvest and LTRdigest. Its user-friendly interface displays LTR
retrotransposon candidates, their putative families and their internal
structure in a hierarchical fashion, allowing the user to "sift" through the
sometimes large results of de novo prediction software. It also offers
customizable filtering and classification functionality.

Alternatives

Package Version Architecture Repository
ltrsift_1.0.2-1_i386.deb 1.0.2 i386 Debian Main
ltrsift - - -

Requires

Name Value
libatk1.0-0 >= 1.12.4
libc6 >= 2.7
libcairo2 >= 1.2.4
libfontconfig1 >= 2.9.0
libfreetype6 >= 2.2.1
libgdk-pixbuf2.0-0 >= 2.22.0
libgenometools0 >= 1.4.2
libglib2.0-0 >= 2.31.8
libgtk2.0-0 >= 2.18.0
libpango1.0-0 >= 1.14.0

Download

Type URL
Binary Package ltrsift_1.0.2-1_amd64.deb
Source Package ltrsift

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install ltrsift deb package:
    # sudo apt-get install ltrsift

Files

Path
/usr/bin/ltrsift
/usr/bin/ltrsift_encode
/usr/share/applications/ltrsift.desktop
/usr/share/doc/ltrsift/README
/usr/share/doc/ltrsift/VERSION
/usr/share/doc/ltrsift/changelog.Debian.gz
/usr/share/doc/ltrsift/changelog.gz
/usr/share/doc/ltrsift/copyright
/usr/share/icons/hicolor/scalable/apps/ltrsift.svg
/usr/share/ltrsift/filters/filter_full.lua
/usr/share/ltrsift/filters/filter_protein_match.lua
/usr/share/ltrsift/filters/filter_ref_match.lua
/usr/share/man/man1/ltrsift.1.gz
/usr/share/man/man1/ltrsift_encode.1.gz
/usr/share/menu/ltrsift
/usr/share/pixmaps/ltrsift.xpm

See Also

Package Description
ltsp-client-core_5.5.4-4_amd64.deb basic LTSP client environment
ltsp-client_5.5.4-4_amd64.deb complete LTSP client environment
ltsp-docs_1.1-1_all.deb LTSP Documentation
ltsp-server-standalone_5.5.4-4_all.deb complete LTSP server environment
ltsp-server_5.5.4-4_all.deb basic LTSP server environment
ltspfs_1.4-1_amd64.deb Fuse based remote filesystem for LTSP thin clients
ltspfsd-core_1.4-1_amd64.deb Fuse based remote filesystem daemon for LTSP thin clients
ltspfsd_1.4-1_all.deb Fuse based remote filesystem hooks for LTSP thin clients
ltt-bin_2.5.2-1_amd64.deb Transitional package for lttng-tools
lttng-modules-dkms_2.5.1-1_all.deb Linux Trace Toolkit (LTTng) kernel modules (DKMS)
lttng-tools_2.5.2-1_amd64.deb LTTng control and utility programs
lttngtop_0.2-2+b1_amd64.deb LTTng 2.0 Top-like trace reader and analyzer
lttoolbox_3.1.0-1.2_amd64.deb Apertium lexical processing modules and tools
lttv_1.5-1_amd64.deb Linux Trace Toolkit Viewer
lua-apr-dev_0.23.2.dfsg-2_amd64.deb Lua development files for the Apache Portable Runtime library
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