ltrsift-examples_1.0.2-1_all.deb


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Description

ltrsift-examples - example data for LTRsift

Distribution: Debian 8 (Jessie)
Repository: Debian Main amd64
Package name: ltrsift-examples
Package version: 1.0.2
Package release: 1
Package architecture: all
Package type: deb
Installed size: 6.89 KB
Download size: 6.86 MB
Official Mirror: ftp.br.debian.org
This package contains test sequences (gzipped FASTA) and annotations (GFF3) from the Drosophila melanogaster (fruit fly) genome, to be used in an example process of postprocessing and classification of newly detected LTR retrotransposons. Scripts for using LTRsift to encode the sequences into a format accepted by LTRsift are included as well.

Alternatives

    Download

    Source package: ltrsift

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install ltrsift-examples deb package:
      # sudo apt-get install ltrsift-examples

    Files

    • /usr/share/doc/ltrsift-examples/changelog.Debian.gz
    • /usr/share/doc/ltrsift-examples/changelog.gz
    • /usr/share/doc/ltrsift-examples/copyright
    • /usr/share/doc/ltrsift-examples/examples/README
    • /usr/share/doc/ltrsift-examples/examples/clean_encseqs
    • /usr/share/doc/ltrsift-examples/examples/dmel-2L-chromosome-r5.8.fasta.gz
    • /usr/share/doc/ltrsift-examples/examples/dmel58.ltrd.gff3.gz
    • /usr/share/doc/ltrsift-examples/examples/prepare_encseqs

    Changelog

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