libjgromacs-java-doc_1.0-1_all.deb


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Description

libjgromacs-java-doc - library for molecular dynamics trajectory analysis (documentation)

Distribution: Debian 8 (Jessie)
Repository: Debian Main amd64
Package name: libjgromacs-java-doc
Package version: 1.0
Package release: 1
Package architecture: all
Package type: deb
Installed size: 1.14 KB
Download size: 86.63 KB
Official Mirror: ftp.br.debian.org
JGromacs is a Java library designed to facilitate the development of cross-platform analysis applications for Molecular Dynamics (MD) simulations. The package contains parsers for file formats applied by GROMACS (GROningen MAchine for Chemical Simulations), one of the most widely used MD simulation packages. JGromacs provides a multilevel object-oriented representation of simulation data to integrate and interconvert sequence, structure and dynamics information. In addititon, a basic analysis toolkit is included in the package. The programmer is also provided with simple tools (e.g. XML-based configuration) to create applications with a user interface resembling the command-line UI of Gromacs applications. This package contains the documentation for libjgromacs-java.

Alternatives

    Download

    Source package: jgromacs

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install libjgromacs-java-doc deb package:
      # sudo apt-get install libjgromacs-java-doc

    Files

    • /usr/share/doc-base/libjgromacs-java-doc
    • /usr/share/doc/libjgromacs-java-doc/changelog.Debian.gz
    • /usr/share/doc/libjgromacs-java-doc/copyright
    • /usr/share/doc/libjgromacs-java-doc/api/allclasses-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/allclasses-noframe.html
    • /usr/share/doc/libjgromacs-java-doc/api/constant-values.html
    • /usr/share/doc/libjgromacs-java-doc/api/deprecated-list.html
    • /usr/share/doc/libjgromacs-java-doc/api/help-doc.html
    • /usr/share/doc/libjgromacs-java-doc/api/index-all.html
    • /usr/share/doc/libjgromacs-java-doc/api/index.html
    • /usr/share/doc/libjgromacs-java-doc/api/overview-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/overview-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/overview-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/package-list
    • /usr/share/doc/libjgromacs-java-doc/api/stylesheet.css
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/Angles.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/Distances.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/Dynamics.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/GNM.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/Similarity.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/Superposition.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/package-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/package-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/analysis/package-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Alignment.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Angle.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Atom.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/FrameIndexSet.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/IndexSet.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/IndexSetList.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Point3D.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/PointList.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Residue.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Sequence.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/SequencePosition.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Structure.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/Trajectory.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/package-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/package-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/data/package-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/db/AtomType.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/db/ResidueType.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/db/package-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/db/package-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/db/package-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/io/IOData.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/io/IOMath.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/io/package-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/io/package-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/io/package-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/ui/Application.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/ui/TemplateApplication.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/ui/package-frame.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/ui/package-summary.html
    • /usr/share/doc/libjgromacs-java-doc/api/jgromacs/ui/package-tree.html
    • /usr/share/doc/libjgromacs-java-doc/api/resources/inherit.gif

    Changelog

    2012-05-16 - Steffen Moeller <moeller@debian.org> jgromacs (1.0-1) unstable; urgency=low * Initial release (Closes: #673139)

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