libgenome-1.3-dev_1.3.1-7_amd64.deb


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Description

libgenome-1.3-dev - toolkit for developing bioinformatic related software (devel)

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name libgenome-1.3-dev
Package version 1.3.1
Package release 7
Package architecture amd64
Package type deb
Installed size 1.39 KB
Download size 170.88 KB
Official Mirror ftp.br.debian.org
libGenome is a freely available toolkit for developing bioinformatic related
software in C++.  It is intended to take the hassle out of performing common
tasks on genetic sequence and annotation data.
Among other things, libGenome can help you:
* Read and write Multi-FastA format files
* Read and write GenBank flat file database entries
* Append, chop, truncate, reverse, complement, translate, and otherwise
mangle sequence data
* Access annotation in GenBank flat files
This is the development package containing the statically linked
library and the header files.

Alternatives

Package Version Architecture Repository
libgenome-1.3-dev_1.3.1-7_i386.deb 1.3.1 i386 Debian Main
libgenome-1.3-dev - - -

Requires

Name Value
libgenome-1.3-0 = 1.3.1-7

Provides

Name Value
libgenome-dev -

Conflicts

Name Value
libgenome-dev -

Download

Type URL
Binary Package libgenome-1.3-dev_1.3.1-7_amd64.deb
Source Package libgenome

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libgenome-1.3-dev deb package:
    # sudo apt-get install libgenome-1.3-dev

Files

Path
/usr/include/libGenome-1.3/libGenome/IntervalSequenceTree.h
/usr/include/libGenome-1.3/libGenome/OmpGuard.h
/usr/include/libGenome-1.3/libGenome/gnABISource.h
/usr/include/libGenome-1.3/libGenome/gnBaseFeature.h
/usr/include/libGenome-1.3/libGenome/gnBaseFilter.h
/usr/include/libGenome-1.3/libGenome/gnBaseHeader.h
/usr/include/libGenome-1.3/libGenome/gnBaseQualifier.h
/usr/include/libGenome-1.3/libGenome/gnBaseSource.h
/usr/include/libGenome-1.3/libGenome/gnBaseSpec.h
/usr/include/libGenome-1.3/libGenome/gnClone.h
/usr/include/libGenome-1.3/libGenome/gnCompare.h
/usr/include/libGenome-1.3/libGenome/gnContigSpec.h
/usr/include/libGenome-1.3/libGenome/gnDNASequence.h
/usr/include/libGenome-1.3/libGenome/gnDataBaseSource.h
/usr/include/libGenome-1.3/libGenome/gnDebug.h
/usr/include/libGenome-1.3/libGenome/gnDefs.h
/usr/include/libGenome-1.3/libGenome/gnException.h
/usr/include/libGenome-1.3/libGenome/gnExceptionCode.h
/usr/include/libGenome-1.3/libGenome/gnFASSource.h
/usr/include/libGenome-1.3/libGenome/gnFastTranslator.h
/usr/include/libGenome-1.3/libGenome/gnFeature.h
/usr/include/libGenome-1.3/libGenome/gnFileContig.h
/usr/include/libGenome-1.3/libGenome/gnFileSource.h
/usr/include/libGenome-1.3/libGenome/gnFilter.h
/usr/include/libGenome-1.3/libGenome/gnFragmentSpec.h
/usr/include/libGenome-1.3/libGenome/gnGBKSource.h
/usr/include/libGenome-1.3/libGenome/gnGenomeSpec.h
/usr/include/libGenome-1.3/libGenome/gnLocation.h
/usr/include/libGenome-1.3/libGenome/gnMultiSpec.h
/usr/include/libGenome-1.3/libGenome/gnPosSpecificTranslator.h
/usr/include/libGenome-1.3/libGenome/gnProteinSequence.h
/usr/include/libGenome-1.3/libGenome/gnRAWSource.h
/usr/include/libGenome-1.3/libGenome/gnRNASequence.h
/usr/include/libGenome-1.3/libGenome/gnSEQSource.h
/usr/include/libGenome-1.3/libGenome/gnSequence.h
/usr/include/libGenome-1.3/libGenome/gnSetup.h
/usr/include/libGenome-1.3/libGenome/gnSourceFactory.h
/usr/include/libGenome-1.3/libGenome/gnSourceHeader.h
/usr/include/libGenome-1.3/libGenome/gnSourceQualifier.h
/usr/include/libGenome-1.3/libGenome/gnSourceSpec.h
/usr/include/libGenome-1.3/libGenome/gnStringHeader.h
/usr/include/libGenome-1.3/libGenome/gnStringQualifier.h
/usr/include/libGenome-1.3/libGenome/gnStringSpec.h
/usr/include/libGenome-1.3/libGenome/gnStringTools.h
/usr/include/libGenome-1.3/libGenome/gnTranslator.h
/usr/include/libGenome-1.3/libGenome/gnVersion.h
/usr/lib/x86_64-linux-gnu/libGenome-1.3.a
/usr/lib/x86_64-linux-gnu/libGenome-1.3.so
/usr/lib/x86_64-linux-gnu/pkgconfig/libGenome-1.3.pc
/usr/share/doc/libgenome-1.3-dev/README.Debian
/usr/share/doc/libgenome-1.3-dev/changelog.Debian.gz
/usr/share/doc/libgenome-1.3-dev/changelog.gz
/usr/share/doc/libgenome-1.3-dev/copyright

Changelog

2014-06-13 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-7) unstable; urgency=medium
* debian/rules: override libgomp1-dev dependency by nothing
Closes: #751295
2014-04-13 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-6) unstable; urgency=medium
* use dh-autoreconf
Closes: #744609
* debian/rules: simplify d-shlibs call
2013-12-06 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-5) unstable; urgency=low
* symbols control file does more harm than good - deactivating
Closes: #731485
* d/lintian-overrides: override missing symbols control file warning
2013-11-07 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-4) unstable; urgency=low
* debian/control:
- cme fix dpkg-control
- canonical Vcs fields
- debhelper 9
- remove doxygen from Build-Depends since we do not create the
documentation anyway (see remark in README.Debian
- drop cdbs from Build-Depends
* debian/rules: switch from cdbs to dh
* provide symbols file
* debian/copyright: DEP5
2010-04-29 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-3) unstable; urgency=low
* Standards-Version: 3.8.4 (no changes needed)
* Using Dpkg source format version ‘3.0 (quilt)’ (debian/source/format)
* debian/rules: fix override exception for d-shlibmove:
--override s/libstdc\+\+6-dev// (needs escaping the '+')
2008-06-26 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-2) unstable; urgency=low
* Stop using d-shlibs hack which was intended to prevent dependency
from g++-4.1 lib.  The dependency is *really* stupid but the hack
was intended to be temporary and no really good solution.
* Standards-Version: 3.8.3 (no changes needed)
* Removed quilt Build-Depends
* Added missing ${misc:Depends}
* Remove *.la file according to
http://lists.debian.org/debian-devel/2009/08/msg00783.html
This has to be done manually until d-shlibmove stops moving this
file (bug against d-shlibs just filed)
* Debhelper 7
2008-06-25 - Andreas Tille <tille@debian.org>
libgenome (1.3.1-1) unstable; urgency=low
* New upstream version
* debian/get-orig-source contains code to obtain snapshot releases,
final releases should be obtained via uscan using the watch file
* debian/rules: more consequent usage of variables
* Fixed watch file
* Standards-Version: 3.8.0 (no changes needed)
2008-04-08 - Andreas Tille <tille@debian.org>
libgenome (1.3.0-5) unstable; urgency=low
* Another "#include <cstring>" was obviousely missing.  I know
compiled successfully in a g++-4.3 environment which makes me
positive that this finally
Closes: #474416
2008-04-07 - Andreas Tille <tille@debian.org>
libgenome (1.3.0-4) unstable; urgency=low
* Even more missing includes (Thanks to Kumar Appaiah
<akumar@ee.iitm.ac.in>)
Closes: #474416
2008-04-05 - Andreas Tille <tille@debian.org>
libgenome (1.3.0-3) unstable; urgency=low
* Just another #include <cstring> to fix also the strchr issues
Closes: #474416

See Also

Package Description
libgenome-model-tools-music-perl_0.04-1_all.deb module for finding mutations of significance in cancer
libgenome-perl_0.06-1_all.deb pipelines, tools, and data management for genomics
libgenometools0-dev_1.5.3-2_amd64.deb development files for GenomeTools
libgenometools0_1.5.3-2_amd64.deb versatile genome analysis library
libgentlyweb-utils-java-doc_1.5-1_all.deb Documentation - java utility library used by josql
libgentlyweb-utils-java_1.5-1_all.deb java utility library used by josql
libgeo-coder-googlev3-perl_0.13-1_all.deb Perl module providing access to Google Maps v3 Geocoding API
libgeo-coordinates-itm-perl_0.02-1_all.deb conversion module between lat/lon and Irish Transverse Mercator
libgeo-coordinates-osgb-perl_2.06-1_all.deb converting module between Lat/Lon and the British National Grid
libgeo-coordinates-utm-perl_0.11-1_all.deb Perl extension for Latitiude Longitude conversions
libgeo-distance-perl_0.20-3_all.deb calculate distances and closest locations
libgeo-distance-xs-perl_0.13-2_amd64.deb calculate distances and closest locations (XS version)
libgeo-google-mapobject-perl_0.06-2_all.deb module managing the server side of the Google Maps API
libgeo-googleearth-pluggable-perl_0.15-2_all.deb module to generate GoogleEarth Documents
libgeo-gpx-perl_0.26-1_all.deb Perl module for creating and parsing GPX files
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