libbpp-phyl9_2.1.0-1_amd64.deb


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Description

libbpp-phyl9 - Bio++ Phylogenetic library

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name libbpp-phyl9
Package version 2.1.0
Package release 1
Package architecture amd64
Package type deb
Installed size 7.37 KB
Download size 1.75 MB
Official Mirror ftp.br.debian.org
Contains the Bio++ classes for phylogenetics.

Alternatives

Package Version Architecture Repository
libbpp-phyl9_2.1.0-1_i386.deb 2.1.0 i386 Debian Main
libbpp-phyl9 - - -

Requires

Name Value
libbpp-core2 -
libbpp-seq9 >= 2.1.0
libc6 >= 2.14
libgcc1 >= 1:4.1.1
libstdc++6 >= 4.4.0

Download

Type URL
Binary Package libbpp-phyl9_2.1.0-1_amd64.deb
Source Package libbpp-phyl

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libbpp-phyl9 deb package:
    # sudo apt-get install libbpp-phyl9

Files

Path
/usr/lib/libbpp-phyl.so.9
/usr/lib/libbpp-phyl.so.9.1.3
/usr/share/doc/libbpp-phyl9/changelog.Debian.gz
/usr/share/doc/libbpp-phyl9/changelog.gz
/usr/share/doc/libbpp-phyl9/copyright

Changelog

2013-03-07 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (2.1.0-1) unstable; urgency=low
* New RateDistribution classes
* New models for protein sequences (COaLA)
* Support for gaps in parsimony score
* Improved and extended support for BppO
* Several bugs fixed and warnings removed
2013-02-09 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (2.0.3-1) unstable; urgency=low
* Reorganized model hierarchy
* New pairwise models
* Several bugs fixed
2011-06-09 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (2.0.2-1) unstable; urgency=low
* RFP: Bio++ -- The Bio++ bioinformatics libraries. (Closes: #616373).
* Packages are now non-native.
* Exact substitution mapping with detailled counts.
* Backup system for ML estimation.
2011-02-28 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (2.0.1) unstable; urgency=low
* Fixed bug #27
* Improved tree drawing algorithms.
2011-02-07 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (2.0.0) unstable; urgency=low
* Better mixed models
* Extended substitution mapping framework
* More bug fixed, notably in simulation procedures
* Topology comparison tools (ELW)
* Improved graphic classes
2010-03-25 - Julien Dutheil <julien.dutheil@univ-montp2.fr>
libbpp-phyl (1.9.0) unstable; urgency=low
* Several bugs fixed and improvements, compilation with -Weffc++
* Codon models
* Improved non-homogeneous classes
* Improved tree drawing classes
2009-06-10 - Julien Dutheil <jdutheil@birc.au.dk>
libbpp-phyl (1.8.0) unstable; urgency=low
* Several buf fixed and improvements.
* New support for Nexus tree files.
* New syntax for model description using keyvals.
2008-12-11 - Julien Dutheil <jdutheil@birc.au.dk>
libbpp-phyl (1.7.0) unstable; urgency=low
* Several bug fixed and improvements...
2008-09-24 - Julien Dutheil <jdutheil@birc.au.dk>
libbpp-phyl (1.6.0) unstable; urgency=low
* New +F protein models + bugs fixed.
2008-07-21 - Julien Dutheil <jdutheil@birc.au.dk>
libbpp-phyl (1.5.1) unstable; urgency=low
* Initial Release.

See Also

Package Description
libbpp-popgen-dev_2.1.0-1_amd64.deb Bio++ Population Genetics library development files
libbpp-popgen6_2.1.0-1_amd64.deb Bio++ Population Genetics library
libbpp-qt-dev_2.1.0-1_amd64.deb Bio++ Qt Graphic classes library development files
libbpp-qt1_2.1.0-1_amd64.deb Bio++ Qt Graphic classes library
libbpp-raa-dev_2.1.0-1_amd64.deb Bio++ Remote Acnuc Access library development files
libbpp-raa1_2.1.0-1_amd64.deb Bio++ Remote Acnuc Access library
libbpp-seq-dev_2.1.0-1_amd64.deb Bio++ Sequence library development files
libbpp-seq-omics-dev_2.1.0-1_amd64.deb Bio++ Sequence library: genomics components
libbpp-seq-omics1_2.1.0-1_amd64.deb Bio++ Sequence library: genomics components
libbpp-seq9_2.1.0-1_amd64.deb Bio++ Sequence library
libbrahe-1.3-3_1.3.2-4_amd64.deb heterogeneous C library of numeric functions
libbrahe-dev_1.3.2-4_amd64.deb heterogeneous C library of numeric functions
libbrailleutils-java-doc_1.2.3-1_all.deb javadoc for brailleUtils for converting/embossing PEF files
libbrailleutils-java_1.2.3-1_all.deb cross platform library for embossing/converting PEF-files
libbrasero-media3-1_3.11.4-1.1_amd64.deb CD/DVD burning library for GNOME - runtime
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