libbio-primerdesigner-perl_0.07-3_all.deb


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Description

libbio-primerdesigner-perl - Perl module to design PCR primers using primer3 and epcr

Distribution: Debian 8 (Jessie)
Repository: Debian Main amd64
Package name: libbio-primerdesigner-perl
Package version: 0.07
Package release: 3
Package architecture: all
Package type: deb
Installed size: 109 B
Download size: 44.76 KB
Official Mirror: ftp.br.debian.org
Bio::PrimerDesigner provides a low-level interface to the primer3 and epcr binary executables and supplies methods to return the results. In addition to accessing local installations of primer3 or e-PCR, it also offers the ability to accessing the primer3 binary via a remote server.

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    Source package: libbio-primerdesigner-perl

    Install Howto

    1. Update the package index:
      # sudo apt-get update
    2. Install libbio-primerdesigner-perl deb package:
      # sudo apt-get install libbio-primerdesigner-perl

    Files

    • /usr/bin/primer_designer
    • /usr/share/doc/libbio-primerdesigner-perl/changelog.Debian.gz
    • /usr/share/doc/libbio-primerdesigner-perl/copyright
    • /usr/share/man/man1/primer_designer.1p.gz
    • /usr/share/man/man3/Bio::PrimerDesigner.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::Remote.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::Result.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::Tables.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::epcr.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::ispcr.3pm.gz
    • /usr/share/man/man3/Bio::PrimerDesigner::primer3.3pm.gz
    • /usr/share/perl5/Bio/PrimerDesigner.pm
    • /usr/share/perl5/Bio/PrimerDesigner/Config.pm
    • /usr/share/perl5/Bio/PrimerDesigner/Remote.pm
    • /usr/share/perl5/Bio/PrimerDesigner/Result.pm
    • /usr/share/perl5/Bio/PrimerDesigner/Tables.pm
    • /usr/share/perl5/Bio/PrimerDesigner/epcr.pm
    • /usr/share/perl5/Bio/PrimerDesigner/ispcr.pm
    • /usr/share/perl5/Bio/PrimerDesigner/primer3.pm

    Changelog

    2013-09-03 - Damyan Ivanov <dmn@debian.org> libbio-primerdesigner-perl (0.07-3) unstable; urgency=low * Team upload * add patch fixing hash manipulation inside each. Fixes test failures with perl 5.18 (Closes: #711426)

    2013-08-07 - gregor herrmann <gregoa@debian.org> libbio-primerdesigner-perl (0.07-2) unstable; urgency=low [ Ryan Niebur ] * Email change: Jonathan Yu -> jawnsy@cpan.org * Email change: Ryan Niebur -> ryan@debian.org [ gregor herrmann ] * debian/control: Changed: (build-)depend on perl instead of perl- modules. * Re-wrap long description. * Don't install empty Bio::PrimerDesigner::Config.3pm manpage; thanks lintian. * Remove alternative (build) dependencies that are already satisfied in oldstable. [ Ansgar Burchardt ] * debian/control: Convert Vcs-* fields to Git. [ gregor herrmann ] * debian/control: update {versioned,alternative} (build) dependencies. [ Salvatore Bonaccorso ] * Change search.cpan.org based URIs to metacpan.org based URIs [ gregor herrmann ] * Switch to "3.0 (quilt)" source format. * Add a patch to use Module::Build's args() instead of Getopt::Long. (Closes: #718120) * debian/copyright: switch formatting to Copyright-Format 1.0. * Update debian/rules and remove debian/clean. * Bump debhelper compatibility level to 8. * Declare compliance with Debian Policy 3.9.4.

    2009-08-04 - Charles Plessy <plessy@debian.org> libbio-primerdesigner-perl (0.07-1) unstable; urgency=low * New upstream release (no changes on Linux systems). [ Jonathan Yu ] * Standards-Version 3.8.2 * Added myself to Uploaders. * Do real clean to clean things up (get rid of the generated Makefile) [ Nathan Handler ] * debian/watch: Update to ignore development releases. [ Charles Plessy ] * Refreshed and prettified debian/copyright. * Restored the skipping of the remote.t test in debian/rules after it was factorised using Debhelper’s ”dh” command. [ Ryan Niebur ] * Use --buildsystem=perl_build in debian/rules. * Test if Build is present before calling dh_auto_clean in debian/rules. (Temporary workaround for debhelper bug #539848.) * Add myself to Uploaders

    2009-05-02 - gregor herrmann <gregoa@debian.org> libbio-primerdesigner-perl (0.06-1) unstable; urgency=low [ Charles Plessy ] * debian/copyright: show the way to GPLv3, not GPLv2. [ gregor herrmann ] * debian/rules: skip test t/remote.t which tries to connect to somewhere and causes a FBTFS; thanks to Daniel Schepler for the bug report (closes: #526566) * New upstream release. * debian/copyright: update years of upstream copyright. * Set Standards-Version to 3.8.1 (no changes). * Add /me to Uploaders. * debian/control: make the short description a noun phrase.

    2009-03-08 - Charles Plessy <plessy@debian.org> libbio-primerdesigner-perl (0.05-1) unstable; urgency=low * New upstream release clarifying license. * debian/control: - Build-depend on libtest-pod-perl for automatic tests at build time.

    2009-01-22 - Charles Plessy <plessy@debian.org> libbio-primerdesigner-perl (0.04-1) unstable; urgency=low * Initial Release (Closes: #512718).

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