libanfo0-dev_0.98-4+b1_amd64.deb


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Description

libanfo0-dev - Development files for Short Read Aligner/Mapper from MPG

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name libanfo0-dev
Package version 0.98
Package release 4+b1
Package architecture amd64
Package type deb
Installed size 2.11 KB
Download size 333.88 KB
Official Mirror ftp.br.debian.org
Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes
more after BLAST/BLAT. It's most useful for the alignment of sequencing reads
where the DNA sequence is somehow modified (think ancient DNA or bisulphite
treatment) and/or there is more divergence between sample and reference than
what fast mappers will handle gracefully (say the reference genome is missing
and a related species is used instead).
This package contains the development files that might be used in connection
with the anfo binaries.

Alternatives

Package Version Architecture Repository
libanfo0-dev_0.98-4+b1_i386.deb 0.98 i386 Debian Main
libanfo0-dev - - -

Requires

Name Value
libanfo0 = 0.98-4+b1
libbz2-dev -
libelk0-dev -
libpopt-dev -
libprotobuf-dev -
zlib1g-dev -

Provides

Name Value
libanfo-dev -

Conflicts

Name Value
libanfo-dev -

Download

Type URL
Binary Package libanfo0-dev_0.98-4+b1_amd64.deb
Source Package anfo

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libanfo0-dev deb package:
    # sudo apt-get install libanfo0-dev

Files

Path
/usr/include/anfo/align.h
/usr/include/anfo/align_fwd.h
/usr/include/anfo/anfo_common.h
/usr/include/anfo/compress_stream.h
/usr/include/anfo/concurrent_stream.h
/usr/include/anfo/conffile.h
/usr/include/anfo/ducttape.h
/usr/include/anfo/index.h
/usr/include/anfo/logdom.h
/usr/include/anfo/misc_streams.h
/usr/include/anfo/output_streams.h
/usr/include/anfo/sequence.h
/usr/include/anfo/stream.h
/usr/include/anfo/trim.h
/usr/include/anfo/util.h
/usr/lib/x86_64-linux-gnu/libanfo.a
/usr/lib/x86_64-linux-gnu/libanfo.so
/usr/share/doc/libanfo0-dev/changelog.Debian.amd64.gz
/usr/share/doc/libanfo0-dev/changelog.Debian.gz
/usr/share/doc/libanfo0-dev/copyright

Changelog

See anfo_0.98-4+b1_amd64.deb changelog.

See Also

Package Description
libanfo0_0.98-4+b1_amd64.deb Library for Short Read Aligner/Mapper from MPG
libanimal-sniffer-java-doc_1.11-1_all.deb Documentation for Animal Sniffer
libanimal-sniffer-java_1.11-1_all.deb JDK/API verification tools
libanjuta-3-0_3.14.0-1_amd64.deb GNOME development IDE, for C/C++ - shared libraries
libanjuta-dev_3.14.0-1_amd64.deb GNOME development IDE, for C/C++ - development files
libann-dev_1.1.2+doc-5_amd64.deb Approximate Nearest Neighbor Searching library (development files)
libann0_1.1.2+doc-5_amd64.deb Approximate Nearest Neighbor Searching library
libannotation-indexer-java-doc_1.9-1_all.deb Documentation for libannotation-indexer-java
libannotation-indexer-java_1.9-1_all.deb Indexing and validation of Java annotations
libantelope-java-doc_3.5.1-2_all.deb graphical user interface for Ant - documentation
libantelope-java_3.5.1-2_all.deb graphical user interface for Ant
libanthy-dev_9100h-24_amd64.deb input method for Japanese - development files
libanthy0_9100h-24_amd64.deb input method for Japanese - runtime library
libantlr-dev_2.7.7+dfsg-6_amd64.deb language tool for constructing recognizers, compilers etc
libantlr-java_2.7.7+dfsg-6_all.deb language tool for constructing recognizers, compilers etc (java library)
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