cassiopee_1.0.1+dfsg-3+b1_amd64.deb


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Description

cassiopee - index and search tool in genomic sequences

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package filename cassiopee_1.0.1+dfsg-3+b1_amd64.deb
Package name cassiopee
Package version 1.0.1+dfsg
Package release 3+b1
Package architecture amd64
Package type deb
Category science
Homepage https://github.com/osallou/cassiopee-c
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 12.02 KB
Installed size 70.00 KB
Cassiopee index and search library C implementation.
It is a complete rewrite of the ruby Cassiopee gem. It scans an input
genomic sequence (dna/rna/protein) and search for a subsequence with
exact match or allowing substitutions (Hamming distance) and/or
insertion/deletions.

Alternatives

Package Version Architecture Repository
cassiopee_1.0.1+dfsg-3_i386.deb 1.0.1+dfsg i386 Debian Main
cassiopee - - -

Requires

Name Value
libboost-iostreams1.55.0 -
libboost-serialization1.55.0 -
libc6 >= 2.4
libcassie1 -
libgcc1 >= 1:4.1.1
libgomp1 >= 4.2.1
libgoogle-glog0 -
libstdc++6 >= 4.6

Download

Type URL
Mirror ftp.br.debian.org
Binary Package cassiopee_1.0.1+dfsg-3+b1_amd64.deb
Source Package cassiopee

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install cassiopee deb package:
    # sudo apt-get install cassiopee

Files

Path
/usr/bin/cassiopee
/usr/bin/cassiopeeknife
/usr/share/doc/cassiopee/README.md
/usr/share/doc/cassiopee/changelog.Debian.amd64.gz
/usr/share/doc/cassiopee/changelog.Debian.gz
/usr/share/doc/cassiopee/changelog.gz
/usr/share/doc/cassiopee/copyright
/usr/share/man/man1/cassiopee.1.gz
/usr/share/man/man1/cassiopeeknife.1.gz

Changelog

2014-05-27 - Olivier Sallou <osallou@debian.org>
cassiopee (1.0.1+dfsg-3) unstable; urgency=medium
* d/control: remove unnecessary dep, managed by shlibs. 
2014-05-26 - Olivier Sallou <osallou@debian.org>
cassiopee (1.0.1+dfsg-2) unstable; urgency=medium
* Fix missing Depends (Closes: #749302). 
* Remove hard coded runtime dependencies (Closes: #749303).
2014-04-14 - Olivier Sallou <osallou@debian.org>
cassiopee (1.0.1+dfsg-1) unstable; urgency=low
* New upstream release to fix FTBS on some archs (test failure)
2014-04-08 - Olivier Sallou <osallou@debian.org>
cassiopee (1.0+dfsg-1) unstable; urgency=low
* Initial release (Closes: #743930)

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cbflib-doc_0.9.2.2-1_all.deb documentation for CBFlib
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