cassiopee - index and search tool in genomic sequences

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package filename cassiopee_1.0.1+dfsg-3+b1_amd64.deb
Package name cassiopee
Package version 1.0.1+dfsg
Package release 3+b1
Package architecture amd64
Package type deb
Category science
License -
Maintainer Debian Med Packaging Team <>
Download size 12.02 KB
Installed size 70.00 KB
Cassiopee index and search library C implementation.
It is a complete rewrite of the ruby Cassiopee gem. It scans an input
genomic sequence (dna/rna/protein) and search for a subsequence with
exact match or allowing substitutions (Hamming distance) and/or


Package Version Architecture Repository
cassiopee_1.0.1+dfsg-3_i386.deb 1.0.1+dfsg i386 Debian Main
cassiopee - - -


Name Value
libboost-iostreams1.55.0 -
libboost-serialization1.55.0 -
libc6 >= 2.4
libcassie1 -
libgcc1 >= 1:4.1.1
libgomp1 >= 4.2.1
libgoogle-glog0 -
libstdc++6 >= 4.6


Type URL
Binary Package cassiopee_1.0.1+dfsg-3+b1_amd64.deb
Source Package cassiopee

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install cassiopee deb package:
    # sudo apt-get install cassiopee




2014-05-27 - Olivier Sallou <>
cassiopee (1.0.1+dfsg-3) unstable; urgency=medium
* d/control: remove unnecessary dep, managed by shlibs. 
2014-05-26 - Olivier Sallou <>
cassiopee (1.0.1+dfsg-2) unstable; urgency=medium
* Fix missing Depends (Closes: #749302). 
* Remove hard coded runtime dependencies (Closes: #749303).
2014-04-14 - Olivier Sallou <>
cassiopee (1.0.1+dfsg-1) unstable; urgency=low
* New upstream release to fix FTBS on some archs (test failure)
2014-04-08 - Olivier Sallou <>
cassiopee (1.0+dfsg-1) unstable; urgency=low
* Initial release (Closes: #743930)

See Also

Package Description
castle-combat_0.8.1.dfsg.1-3.1_all.deb game where the player builds one castle and destroys others
castle-game-engine-doc_5.0.0-3_all.deb Castle Game Engine - Developer's Documentation
castle-game-engine-src_5.0.0-3_all.deb Castle Game Engine - Source code for Lazarus integration
catch_1.0+m10git1e2f1d16-1_amd64.deb C++ Automated Test Cases in Headers
catcodec_1.0.5-2_amd64.deb tool to decode/encode the sample catalogue for OpenTTD
catdoc_0.94.4-1.1+deb8u1_amd64.deb MS-Word to TeX or plain text converter
catdvi_0.14-12.1_amd64.deb DVI to plain text translator
catfish_1.2.2-1_all.deb File searching tool which is configurable via the command line
caveconverter_0~20131117-1_all.deb Cave survey data format converter
cavezofphear_0.5.1-1_amd64.deb ASCII Boulder Dash clone
cb2bib_1.4.9-4_amd64.deb extract bibliographic references from various sources
cba_0.3.6-4.1_amd64.deb Continuous Beam Analysis
cbflib-bin_0.9.2.2-1_amd64.deb utilities to manipulate CBF files
cbflib-doc_0.9.2.2-1_all.deb documentation for CBFlib
cbios_0.25-2_all.deb open source MSX BIOS roms