avogadro_1.0.3-10.1+b2_amd64.deb


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Description

avogadro - Molecular Graphics and Modelling System

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name avogadro
Package version 1.0.3
Package release 10.1+b2
Package architecture amd64
Package type deb
Installed size 7.16 KB
Download size 3.30 MB
Official Mirror ftp.br.debian.org
Avogadro is a molecular graphics and modelling system targeted at molecules
and biomolecules.  It can visualize properties like molecular orbitals or
electrostatic potentials and features an intuitive molecular builder.
Features include:
* Molecular modeller with automatic force-field based geometry optimization
* Molecular Mechanics including constraints and conformer searches
* Visualization of molecular orbitals and general isosurfaces
* Visualization of vibrations and plotting of vibrational spectra
* Support for crystallographic unit cells
* Input generation for the Gaussian, GAMESS and MOLPRO quantum chemistry
packages
* Flexible plugin architecture and Python scripting
File formats Avogadro can read include PDB, XYZ, CML, CIF, Molden, as well as
Gaussian, GAMESS and MOLPRO output.

Alternatives

Package Version Architecture Repository
avogadro_1.0.3-10.1+b2_i386.deb 1.0.3 i386 Debian Main
avogadro - - -

Requires

Name Value
libavogadro1 = 1.0.3-10.1+b2
libc6 >= 2.14
libgcc1 >= 1:4.1.1
libgl2ps0 -
libopenbabel4 -
libqt4-opengl >= 4:4.5.3
libqtcore4 >= 4:4.7.0~beta1
libqtgui4 >= 4:4.5.3
libstdc++6 >= 4.2.1
libx11-6 -

Download

Type URL
Binary Package avogadro_1.0.3-10.1+b2_amd64.deb
Source Package avogadro

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install avogadro deb package:
    # sudo apt-get install avogadro

Files

Path
/usr/bin/avogadro
/usr/bin/avopkg
/usr/share/applications/avogadro.desktop
/usr/share/avogadro/i18n/avogadro_af.qm
/usr/share/avogadro/i18n/avogadro_ar.qm
/usr/share/avogadro/i18n/avogadro_bg.qm
/usr/share/avogadro/i18n/avogadro_ca.qm
/usr/share/avogadro/i18n/avogadro_ca@valencia.qm
/usr/share/avogadro/i18n/avogadro_cs.qm
/usr/share/avogadro/i18n/avogadro_da.qm
/usr/share/avogadro/i18n/avogadro_de.qm
/usr/share/avogadro/i18n/avogadro_el.qm
/usr/share/avogadro/i18n/avogadro_en_AU.qm
/usr/share/avogadro/i18n/avogadro_en_CA.qm
/usr/share/avogadro/i18n/avogadro_en_GB.qm
/usr/share/avogadro/i18n/avogadro_es.qm
/usr/share/avogadro/i18n/avogadro_eu.qm
/usr/share/avogadro/i18n/avogadro_fi.qm
/usr/share/avogadro/i18n/avogadro_fr.qm
/usr/share/avogadro/i18n/avogadro_gl.qm
/usr/share/avogadro/i18n/avogadro_he.qm
/usr/share/avogadro/i18n/avogadro_hr.qm
/usr/share/avogadro/i18n/avogadro_hu.qm
/usr/share/avogadro/i18n/avogadro_id.qm
/usr/share/avogadro/i18n/avogadro_it.qm
/usr/share/avogadro/i18n/avogadro_ja.qm
/usr/share/avogadro/i18n/avogadro_kn.qm
/usr/share/avogadro/i18n/avogadro_ko.qm
/usr/share/avogadro/i18n/avogadro_nb.qm
/usr/share/avogadro/i18n/avogadro_nl.qm
/usr/share/avogadro/i18n/avogadro_oc.qm
/usr/share/avogadro/i18n/avogadro_pl.qm
/usr/share/avogadro/i18n/avogadro_pt.qm
/usr/share/avogadro/i18n/avogadro_pt_BR.qm
/usr/share/avogadro/i18n/avogadro_ru.qm
/usr/share/avogadro/i18n/avogadro_sk.qm
/usr/share/avogadro/i18n/avogadro_sr.qm
/usr/share/avogadro/i18n/avogadro_sv.qm
/usr/share/avogadro/i18n/avogadro_th.qm
/usr/share/avogadro/i18n/avogadro_tr.qm
/usr/share/avogadro/i18n/avogadro_ug.qm
/usr/share/avogadro/i18n/avogadro_uk.qm
/usr/share/avogadro/i18n/avogadro_vi.qm
/usr/share/avogadro/i18n/avogadro_zh_CN.qm
/usr/share/avogadro/i18n/avogadro_zh_TW.qm
/usr/share/avogadro/i18n/libavogadro_ar.qm
/usr/share/avogadro/i18n/libavogadro_bg.qm
/usr/share/avogadro/i18n/libavogadro_bs.qm
/usr/share/avogadro/i18n/libavogadro_ca.qm
/usr/share/avogadro/i18n/libavogadro_ca@valencia.qm
/usr/share/avogadro/i18n/libavogadro_cs.qm
/usr/share/avogadro/i18n/libavogadro_da.qm
/usr/share/avogadro/i18n/libavogadro_de.qm
/usr/share/avogadro/i18n/libavogadro_el.qm
/usr/share/avogadro/i18n/libavogadro_en_AU.qm
/usr/share/avogadro/i18n/libavogadro_en_CA.qm
/usr/share/avogadro/i18n/libavogadro_en_GB.qm
/usr/share/avogadro/i18n/libavogadro_es.qm
/usr/share/avogadro/i18n/libavogadro_eu.qm
/usr/share/avogadro/i18n/libavogadro_fi.qm
/usr/share/avogadro/i18n/libavogadro_fr.qm
/usr/share/avogadro/i18n/libavogadro_gl.qm
/usr/share/avogadro/i18n/libavogadro_he.qm
/usr/share/avogadro/i18n/libavogadro_hi.qm
/usr/share/avogadro/i18n/libavogadro_hu.qm
/usr/share/avogadro/i18n/libavogadro_id.qm
/usr/share/avogadro/i18n/libavogadro_it.qm
/usr/share/avogadro/i18n/libavogadro_ja.qm
/usr/share/avogadro/i18n/libavogadro_kn.qm
/usr/share/avogadro/i18n/libavogadro_ko.qm
/usr/share/avogadro/i18n/libavogadro_nb.qm
/usr/share/avogadro/i18n/libavogadro_nl.qm
/usr/share/avogadro/i18n/libavogadro_oc.qm
/usr/share/avogadro/i18n/libavogadro_pl.qm
/usr/share/avogadro/i18n/libavogadro_pt.qm
/usr/share/avogadro/i18n/libavogadro_pt_BR.qm
/usr/share/avogadro/i18n/libavogadro_ru.qm
/usr/share/avogadro/i18n/libavogadro_sk.qm
/usr/share/avogadro/i18n/libavogadro_sr.qm
/usr/share/avogadro/i18n/libavogadro_sv.qm
/usr/share/avogadro/i18n/libavogadro_tr.qm
/usr/share/avogadro/i18n/libavogadro_ug.qm
/usr/share/avogadro/i18n/libavogadro_uk.qm
/usr/share/avogadro/i18n/libavogadro_vi.qm
/usr/share/avogadro/i18n/libavogadro_zh_CN.qm
/usr/share/avogadro/i18n/libavogadro_zh_TW.qm
/usr/share/doc/avogadro/changelog.Debian.amd64.gz
/usr/share/doc/avogadro/changelog.Debian.gz
/usr/share/doc/avogadro/changelog.gz
/usr/share/doc/avogadro/copyright
/usr/share/doc/avogadro/examples/1CRN.pdb.gz
/usr/share/doc/avogadro/examples/2-aminoethanol.cml
/usr/share/doc/avogadro/examples/2-thioethanol.cml
/usr/share/doc/avogadro/examples/2_2_2-trifluoroethanol.cml
/usr/share/doc/avogadro/examples/COPYING
/usr/share/doc/avogadro/examples/Fe.sdf
/usr/share/doc/avogadro/examples/ZnO.fract
/usr/share/doc/avogadro/examples/acid_chlorides.smi
/usr/share/doc/avogadro/examples/amines.smi
/usr/share/doc/avogadro/examples/basic1.drawlog.gz
/usr/share/doc/avogadro/examples/basic2.drawlog
/usr/share/doc/avogadro/examples/basic3.drawlog
/usr/share/doc/avogadro/examples/basic4.drawlog.gz
/usr/share/doc/avogadro/examples/basic5.drawlog
/usr/share/doc/avogadro/examples/basic6.drawlog.gz
/usr/share/doc/avogadro/examples/benzene-homo.cube.gz
/usr/share/doc/avogadro/examples/benzene.fchk.gz
/usr/share/doc/avogadro/examples/but-2-yne-1_4-diol.cml
/usr/share/doc/avogadro/examples/butane.cml
/usr/share/doc/avogadro/examples/ch3cl-density.cub.gz
/usr/share/doc/avogadro/examples/ch3cl-esp.cub.gz
/usr/share/doc/avogadro/examples/ch3oh-nmr.qcout.gz
/usr/share/doc/avogadro/examples/co.fchk.gz
/usr/share/doc/avogadro/examples/ethane-1_2-diol.cml
/usr/share/doc/avogadro/examples/ethane.cml
/usr/share/doc/avogadro/examples/ethanol.cml
/usr/share/doc/avogadro/examples/fail1.drawlog.ignore
/usr/share/doc/avogadro/examples/fail2.drawlog.ignore.gz
/usr/share/doc/avogadro/examples/ferrocene.cml
/usr/share/doc/avogadro/examples/methane-gaussian.fchk.gz
/usr/share/doc/avogadro/examples/methane.FChk.gz
/usr/share/doc/avogadro/examples/methane.cml
/usr/share/doc/avogadro/examples/methane.g03.gz
/usr/share/doc/avogadro/examples/methane.inp
/usr/share/doc/avogadro/examples/methane.mp
/usr/share/doc/avogadro/examples/methane.mpo.gz
/usr/share/doc/avogadro/examples/methane.nwo.gz
/usr/share/doc/avogadro/examples/methane.out.gz
/usr/share/doc/avogadro/examples/methanol.cml
/usr/share/doc/avogadro/examples/methanol.jdx.gz
/usr/share/doc/avogadro/examples/methanol.nwo.gz
/usr/share/doc/avogadro/examples/nanotube.xyz.gz
/usr/share/doc/avogadro/examples/porphyrin.cml.gz
/usr/share/doc/avogadro/examples/propan-1-ol.cml
/usr/share/doc/avogadro/examples/propan-2-ol.cml
/usr/share/doc/avogadro/examples/propane.cml
/usr/share/doc/avogadro/examples/sampleIRSpectra.tsv.gz
/usr/share/doc/avogadro/examples/spc216.pdb.gz
/usr/share/doc/avogadro/examples/spc216.xtc.gz
/usr/share/doc/avogadro/examples/thiophene.cml
/usr/share/doc/avogadro/examples/tpy-Ru.sdf.gz
/usr/share/doc/avogadro/examples/tyr-33-conf1.pdb.gz
/usr/share/doc/avogadro/examples/tyr-33-conf2.pdb.gz
/usr/share/doc/avogadro/examples/untitled01.gpr
/usr/share/doc/avogadro/examples/VASP-8LiH/INCAR
/usr/share/doc/avogadro/examples/VASP-8LiH/KPOINTS
/usr/share/doc/avogadro/examples/VASP-8LiH/POSCAR
/usr/share/doc/avogadro/examples/VASP-8LiH/POTCAR.gz
/usr/share/doc/avogadro/examples/VASP-8LiH/readme
/usr/share/man/man1/avogadro.1.gz
/usr/share/man/man1/avopkg.1.gz
/usr/share/menu/avogadro
/usr/share/pixmaps/avogadro-icon.png
/usr/share/pixmaps/avogadro.xpm

Changelog

2013-11-03 - Anton Gladky <gladk@debian.org>
avogadro (1.0.3-10.1) unstable; urgency=low
* Non-maintainer upload.
* Replace eigen2 by eigen3. (Closes: #728610)
2013-06-02 - Debichem Team <debichem-devel@lists.alioth.debian.org>
avogadro (1.0.3-10) unstable; urgency=low
[ Daniel Leidert ]
* debian/rules (override_dh_auto_configure): Drop setting of
-DPYTHON_INCLUDE_DIRS. This didn't work on other architectures than amd64.
* debian/patches/series: Don't use the use_python_include_dirs.patch patch.
2013-06-02 - Debichem Team <debichem-devel@lists.alioth.debian.org>
avogadro (1.0.3-9) unstable; urgency=low
[ Daniel Leidert ]
* debian/rules (override_dh_auto_configure): Try to fix the recently
introduced FTBFSes (really closes: #710703).
* debian/patches/use_python_include_dirs.patch: Reverted to 1.0.3-7.
2013-06-01 - Debichem Team <debichem-devel@lists.alioth.debian.org>
avogadro (1.0.3-8) unstable; urgency=low
[ Daniel Leidert ]
* debian/control (Vcs-Browser, Vcs-Svn): Fixed vcs-field-not-canonical.
* debian/rules: Try to fix an FTBFS if several Python versions are installed
(closes: Bug#710703) and don't FTBFS if there is no multi-arch Python.
* debian/patches/use_python_include_dirs.patch: Updated.
- Removed patch to cmake/modules/PythonDeps.cmake.
2013-05-30 - Debichem Team <debichem-devel@lists.alioth.debian.org>
avogadro (1.0.3-7) unstable; urgency=low
[ Daniel Leidert ]
* Ack NMU.
* debian/rules: Prepare for Python multiarch.
(override_dh_auto_configure): Adjusted likewise.
* debian/patches/use_python_include_dirs.patch: Enabled (closes: #708639).
* debian/patches/series: Adjusted.
2013-05-17 - Matthias Klose <doko@debian.org>
avogadro (1.0.3-6.1) unstable; urgency=low
* Non maintainer upload.
* Fix to build with the libpython multiarch location.
2013-05-12 - Debichem Team <debichem-devel@lists.alioth.debian.org>
avogadro (1.0.3-6) unstable; urgency=low
[ Daniel Leidert ]
* debian/control: Dropped DM-Upload-Allowed field.
(Uploaders): Removed myself.
(Standards-Version): Bumped to 3.9.4.
(Depends): Added non-versioned dependencies to python-numpy, python-qt4
and python-sip (see #679819).
* debian/copyright: Added a hint about the text found in some files in the
testfile directory (closes: #643921). 
* debian/rules: Removed code to generate versioned dependencies to
python-numpy, python-qt4 and python-sip. Enable hardening.
* debian/watch: Minor update to catch bzip2 compressed tarballs and ignore
experimental releases.
* debian/patches/use_python_include_dirs.diff: Added based on the patch by
Ubuntu.
[ Michael Banck ]
* debian/upstream: Added reference. 
2012-06-06 - Daniel Leidert (dale) <daniel.leidert@wgdd.de>
avogadro (1.0.3-5) unstable; urgency=low
* debian/control (Uploaders): Removed Jordan Mantha. Thanks for your work.
(Build-Depends): Use libglew-dev.
(Depends): Let libavogadro-dev depend on libglew-dev.
2012-06-04 - Daniel Leidert (dale) <daniel.leidert@wgdd.de>
avogadro (1.0.3-4) unstable; urgency=low
[ Michael Banck ]
* Acknowledge NMU. 
* debian/patches/hurd_ftbfs.patch: New patch, fixing build on hurd-i386,
thanks to Pino Toscano.
[ Daniel Leidert ]
* debian/control (Standards-Version): Bumped to 3.9.3.
(Build-Depends): Added versioned dependency on python-numpy.
* debian/rules (override_dh_python2): Added call to dh_numpy to fix lintian
error.
* debian/upstream: Added.
2012-01-28 - Steve M. Robbins <smr@debian.org>
avogadro (1.0.3-3.1) unstable; urgency=low
* Non-Maintainer Upload.
* patches/boost148.patch: New.  Work around moc limitation.  Closes:
#653625.

See Also

Package Description
avr-evtd_1.7.7-2_amd64.deb AVR watchdog daemon for Linkstation/Kuroboxes
avr-libc_1.8.0+Atmel3.4.4-1_all.deb Standard C library for Atmel AVR development
avra_1.3.0-1_amd64.deb assembler for Atmel AVR microcontrollers
avrdude-doc_6.1-2_all.deb documentation for avrdude
avrdude_6.1-2_amd64.deb software for programming Atmel AVR microcontrollers
avrp_1.0beta3-7_amd64.deb Programmer for Atmel AVR microcontrollers
avrprog_0.2.2-2_amd64.deb Programmer for Atmel AVR microcontrollers
avw.lv2_0.1.6~dfsg0-1_amd64.deb collection of Voltage Controlled LV2 modules
awardeco_0.2-3.1_amd64.deb Decompress flashfiles equipped with an AWARD BIOS
away_0.9.5+ds-0+nmu2_amd64.deb Terminal locking program
aweather_0.8.1-1+b1_amd64.deb Advanced Weather Monitoring Program
awesfx_0.5.1a-1.1_amd64.deb utility programs for AWE32/64 and Emu10k1 driver
awesome-extra_2012061101_all.deb additional modules for awesome
awesome_3.4.15-1+b1_amd64.deb highly configurable X window manager
awffull_3.10.2-4_amd64.deb web server log analysis program
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