acedb-other-dotter_4.9.39+dfsg.01-5_amd64.deb


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Description

acedb-other-dotter - visualisation of sequence similarity

Property Value
Distribution Debian 8 (Jessie)
Repository Debian Main amd64
Package name acedb-other-dotter
Package version 4.9.39+dfsg.01
Package release 5
Package architecture amd64
Package type deb
Installed size 655 B
Download size 222.69 KB
Official Mirror ftp.br.debian.org
For the analysis of biological sequences, a general principle is to
corresponding regions between related proteins, RNA or DNA.
Dotter displays graphically the similarity of DNA or protein sequence
to itself or another sequence.

Alternatives

Package Version Architecture Repository
acedb-other-dotter_4.9.39+dfsg.01-5_i386.deb 4.9.39+dfsg.01 i386 Debian Main
acedb-other-dotter - - -

Requires

Name Value
libatk1.0-0 >= 1.12.4
libc6 >= 2.7
libcairo2 >= 1.2.4
libfontconfig1 >= 2.8.0
libfreetype6 >= 2.2.1
libgdk-pixbuf2.0-0 >= 2.22.0
libglib2.0-0 >= 2.12.0
libgtk2.0-0 >= 2.24.0
libpango1.0-0 >= 1.14.0
libreadline6 >= 6.0
libx11-6 -

Provides

Name Value
dotter -

Download

Type URL
Binary Package acedb-other-dotter_4.9.39+dfsg.01-5_amd64.deb
Source Package acedb

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install acedb-other-dotter deb package:
    # sudo apt-get install acedb-other-dotter

Files

Path
/usr/bin/dotter
/usr/share/doc/acedb-other-dotter/README.Debian
/usr/share/doc/acedb-other-dotter/changelog.Debian.gz
/usr/share/doc/acedb-other-dotter/copyright
/usr/share/man/man1/dotter.1.gz

Changelog

2011-12-24 - Andreas Tille <tille@debian.org>
acedb (4.9.39+dfsg.01-5) unstable; urgency=low
[ DMPT ]
[Thorsten Alteholz]
* debian/rules: get-orig-source moves target into ../tarballs
[ A. Costa ]
* debian/efetch.1: typo correction (Closes: #650471).
[ Andreas Tille ]
* debian/efetch.1: Remove remark about popcon which is not
relevant for a manpage
2011-10-21 - Andreas Tille <tille@debian.org>
acedb (4.9.39+dfsg.01-4) unstable; urgency=low
* debian/patches/no-curses.patch: Do not build against ncurses
Closes: #646133
2011-07-19 - Andreas Tille <tille@debian.org>
acedb (4.9.39+dfsg.01-3) unstable; urgency=low
* Build-Depends: libreadline-dev (instead of libreadline5-dev)
Closes: #634442
* Standards-Version: 3.9.2 (no changes needed)
* Debhelper 8 (control+compat)
* Fixed Vcs fields
2011-02-28 - Andreas Tille <tille@debian.org>
acedb (4.9.39+dfsg.01-2) unstable; urgency=low
* Applied Ubuntu patch to Debian packaging (thanks to
Fabrice Coutadeur)
Closes: #615690
* debian/watch: mangle version with dfsg
2010-11-05 - Fabrice Coutadeur <fabricesp@ubuntu.com>
acedb (4.9.39+dfsg.01-1ubuntu1) natty; urgency=low
* binutils-gold.patch: patch wmake/LINUX_64_DEF and wmake/LINUX_$_DEF to add
explicit link with libX11. This fixes a FTBFS with binutils-gold.
2010-08-09 - Steffen Moeller <moeller@debian.org>
acedb (4.9.39+dfsg.01-1) unstable; urgency=low
* Corrected for rfc files had somehow sneaked into the uploaded
source tree (Closes: #591506)
* Added get-orig-source target to debian/rules automating the
clensing.
2010-08-09 - Andreas Tille <tille@debian.org>
acedb (4.9.39-3) unstable; urgency=low
[Andreas Tille]
* Group maintenance, added myself to uploaders
* Somebody has provided upstream-metadata.yaml, just
mention this in changelog
* Standards-Version: 3.9.1 (no changes needed)
* Build-Depends: pkg-config, csh
Closes: #589065
Remark: Better than Build-Depending csh would be to port the scripts
in w3rdparty to POSIX
* Added other missing Build-Depends: flex, bison
* debian/source/format: 3.0 (quilt)
2010-07-11 - Steffen Moeller <moeller@debian.org>
acedb (4.9.39-2) unstable; urgency=low
* Cleanups in debian/copyright reaction to previous
rejection (Closes: #542068)
* Completed man pages
- by adding --help as an acceptable argument
- with the help of help2man and some 
- considerable manual editing
2009-08-17 - Steffen Moeller <moeller@debian.org>
acedb (4.9.39-1) experimental; urgency=low
* A first part of ACEDB is packaged
- the belvu alignment viewer
- the dotter pairwise alignment viewer
- the efetch tool to retrieve sequences
* No extra effort like for man pages invested

See Also

Package Description
acedb-other_4.9.39+dfsg.01-5_amd64.deb retrieval of DNA or protein sequences
aces3-data_3.0.8-4_all.deb Advanced Concepts in Electronic Structure III
aces3_3.0.8-4_amd64.deb Advanced Concepts in Electronic Structure III
acfax_981011-17_amd64.deb Receive faxes using your radio and sound card
acheck-rules-fr_0.6_all.deb French rules for acheck
acheck-rules_0.3.1+nmu1_all.deb Basic rules for acheck
acheck_0.5.1+nmu1_all.deb Check common localisation mistakes
achilles_2-8_amd64.deb An artificial life and evolution simulator
ack-grep_2.14-4_all.deb grep-like program specifically for large source trees
acl2-books-certs_6.5-2_all.deb Computational Logic for Applicative Common Lisp: library certificates
acl2-books-source_6.5-2_all.deb Computational Logic for Applicative Common Lisp: library sources
acl2-books_6.5-2_amd64.deb Computational Logic for Applicative Common Lisp: compiled libraries
acl2-doc_6.5-2_all.deb Computational Logic for Applicative Common Lisp: documentation
acl2-emacs_6.5-2_all.deb Computational Logic for Applicative Common Lisp: emacs interface
acl2-infix-source_6.5-2_all.deb Computational Logic for Applicative Common Lisp: infix source
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