velvet-example_1.2.03~nozlibcopy-1_all.deb


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Description

velvet-example - Example data for the Velvet sequence assembler

Property Value
Distribution Debian 7 (Wheezy)
Repository Debian Main i386
Package name velvet-example
Package version 1.2.03~nozlibcopy
Package release 1
Package architecture all
Package type deb
Installed size 5.87 KB
Download size 5.78 MB
Official Mirror ftp.br.debian.org
Velvet is a de novo genomic assembler specially designed for short read
sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and
Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near
Cambridge, in the United Kingdom.
Velvet currently takes in short read sequences, removes errors then produces
high quality unique contigs. It then uses paired read information, if
available, to retrieve the repeated areas between contigs.
This package contains the example data distributed in the sources of Velvet,
a de novo genomic assembler.

Alternatives

Package Version Architecture Repository
velvet-example_1.2.03~nozlibcopy-1_all.deb 1.2.03~nozlibcopy all Debian Main
velvet-example - - -

Requires

Name Value
dpkg >= 1.15.6

Download

Type URL
Binary Package velvet-example_1.2.03~nozlibcopy-1_all.deb
Source Package velvet

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install velvet-example deb package:
    # sudo apt-get install velvet-example

Files

Path
/usr/share/doc/velvet-example/changelog.Debian.gz
/usr/share/doc/velvet-example/changelog.gz
/usr/share/doc/velvet-example/copyright
/usr/share/doc/velvet-example/examples/data/test_long.fa.gz
/usr/share/doc/velvet-example/examples/data/test_reads.fa.gz
/usr/share/doc/velvet-example/examples/data/test_reads.sam.gz
/usr/share/doc/velvet-example/examples/data/test_reference.fa.gz

Changelog

See velvet_1.2.03~nozlibcopy-1_i386.deb changelog.

See Also

Package Description
velvet_1.2.03~nozlibcopy-1_i386.deb Nucleic acid sequence assembler for very short reads
vera_1.17-6_all.deb Dictionary of computer related acronyms -- info format
verbiste-el_0.1.34-1_all.deb French and Italian conjugator - emacs extension
verbiste-gnome_0.1.34-1_i386.deb French and Italian conjugator - GNOME interface
verbiste_0.1.34-1_i386.deb French and Italian conjugator
verilator_3.833-1_i386.deb fast free Verilog simulator
verilog_0.9.5-1_all.deb Icarus verilog compiler (transitional package)
veromix-common_0.18.3-1_all.deb Mixer for the PulseAudio sound server (common)
veromix_0.18.3-1_all.deb Mixer for the PulseAudio sound server (GTK+)
verse_0.22.6_i386.deb Daily Devotional Verse from KJV Bible
veusz-helpers_1.15-1_i386.deb Architecture-specific helper module for Veusz
veusz_1.15-1_all.deb 2D scientific plotting application with graphical interface
vflib3-bin_3.6.14.dfsg-3+b1_i386.deb Sample programs using VFlib3
vflib3-dev_3.6.14.dfsg-3+b1_i386.deb Development files for VFlib3
vflib3-doc_3.6.14.dfsg-3_all.deb Documentation for VFlib3
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