tree-puzzle_5.2-7_i386.deb


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Description

tree-puzzle - Reconstruction of phylogenetic trees by maximum likelihood

Property Value
Distribution Debian 7 (Wheezy)
Repository Debian Main i386
Package name tree-puzzle
Package version 5.2
Package release 7
Package architecture i386
Package type deb
Installed size 312 B
Download size 132.82 KB
Official Mirror ftp.br.debian.org
TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that
implements a fast tree search algorithm, quartet puzzling, that allows
analysis of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
Branch lengths can also be calculated under the clock-assumption. In
addition, TREE-PUZZLE offers a novel method, likelihood mapping, to
investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content of
a sequence alignment.

Alternatives

Package Version Architecture Repository
tree-puzzle_5.2-7_amd64.deb 5.2 amd64 Debian Main
tree-puzzle - - -

Requires

Name Value
libc6 >= 2.7
libsprng2 -

Download

Type URL
Binary Package tree-puzzle_5.2-7_i386.deb
Source Package tree-puzzle

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install tree-puzzle deb package:
    # sudo apt-get install tree-puzzle

Files

Path
/usr/bin/tree-puzzle
/usr/share/doc/tree-puzzle/AUTHORS
/usr/share/doc/tree-puzzle/README
/usr/share/doc/tree-puzzle/README.Debian
/usr/share/doc/tree-puzzle/changelog.Debian.gz
/usr/share/doc/tree-puzzle/changelog.gz
/usr/share/doc/tree-puzzle/copyright
/usr/share/man/man1/tree-puzzle.1.gz
/usr/share/menu/tree-puzzle
/usr/share/pixmaps/tree-puzzle.xpm

See Also

Package Description
tree_1.6.0-1_i386.deb displays directory tree, in color
treeline_1.4.1-1_all.deb versatile tree-like structured custom data manager
treetop_1.4.10-5_all.deb Ruby-based text parsing and interpretation (command-line utility)
treeviewx_0.5.1+20100823-1_i386.deb Displays and prints phylogenetic trees
treil_1.8-1.1_i386.deb tree structure into tiles
trend_1.2-1_i386.deb a general-purpose, efficient trend graph
trickle_1.07-9+b1_i386.deb user-space bandwidth shaper
trigger-rally-data_0.6.0-1_all.deb free 3D rally racing car game - data files
trigger-rally_0.6.0-1+b2_i386.deb free 3D rally racing car game
triggerhappy_0.3.4-2_i386.deb global hotkey daemon for Linux
trimage_1.0.5-1_all.deb GUI and command-line interface to optimize image files
triplane_1.0.7-1_i386.deb side-scrolling dogfighting game
triplea_1.5.2.1-1_all.deb Turn based strategy game
tripwire_2.4.2.2-2_i386.deb file and directory integrity checker
tritium_0.3.8-2_all.deb a tabbed/tiling window manager
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