tree-ppuzzle - Parallelized reconstruction of phylogenetic trees by maximum likelihood

Property Value
Distribution Debian 7 (Wheezy)
Repository Debian Main i386
Package name tree-ppuzzle
Package version 5.2
Package release 7
Package architecture i386
Package type deb
Installed size 376 B
Download size 163.66 KB
Official Mirror
TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that
implements a fast tree search algorithm, quartet puzzling, that allows
analysis of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
Branch lengths can also be calculated under the clock-assumption. In
addition, TREE-PUZZLE offers a novel method, likelihood mapping, to
investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content of
a sequence alignment.
This is the parallelized version of tree-puzzle.


Package Version Architecture Repository
tree-ppuzzle_5.2-7_amd64.deb 5.2 amd64 Debian Main
tree-ppuzzle - - -


Name Value
libc6 >= 2.7
libopenmpi1.3 -
libsprng2 -
openmpi-bin -


Type URL
Binary Package tree-ppuzzle_5.2-7_i386.deb
Source Package tree-puzzle

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install tree-ppuzzle deb package:
    # sudo apt-get install tree-ppuzzle



See Also

Package Description
tree-puzzle-doc_5.2-7_all.deb Reconstruction of phylogenetic trees by maximum likelihood
tree-puzzle_5.2-7_i386.deb Reconstruction of phylogenetic trees by maximum likelihood
tree_1.6.0-1_i386.deb displays directory tree, in color
treeline_1.4.1-1_all.deb versatile tree-like structured custom data manager
treetop_1.4.10-5_all.deb Ruby-based text parsing and interpretation (command-line utility)
treeviewx_0.5.1+20100823-1_i386.deb Displays and prints phylogenetic trees
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