arb_6.0.6-4_amd64.deb


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Description

arb - phylogenetic sequence analysis suite - main program

Property Value
Distribution Debian 10 (Buster)
Repository Debian Nonfree amd64
Package filename arb_6.0.6-4_amd64.deb
Package name arb
Package version 6.0.6
Package release 4
Package architecture amd64
Package type deb
Category implemented-in::c interface::graphical interface::x11 non-free/science role::program uitoolkit::motif uitoolkit::xlib x11::application
Homepage http://www.arb-home.de/
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 1.97 MB
Installed size 7.58 MB
ARB is a graphical suite of tools for sequence database handling and data
analysis. A central database of processed (aligned) sequences and any
type of additional data linked to the sequence entries is structured
according to phylogeny or other user-defined criteria.
The ARB project (from the Latin "arbor", a tree) is a joint initiative of
the Lehrstuhl fuer Mikrobiologie http://www.mikro.biologie.tu-muenchen.de/
and the Lehrstuhl fuer Rechnertechnik und Rechnerorganisation
http://wwwbode.informatik.tu-muenchen.de/ of the Technical University
of Munich.

Alternatives

Package Version Architecture Repository
arb_6.0.6-4_i386.deb 6.0.6 i386 Debian Nonfree
arb - - -

Requires

Name Value
arb-common = 6.0.6-4
fastdnaml -
fig2dev -
libarb = 6.0.6-4
libc6 >= 2.15
libgcc1 >= 1:3.0
libglib2.0-0 >= 2.12.0
libstdc++6 >= 5.2
libx11-6 -
libxext6 -
libxm4 >= 2.3.3
libxpm4 -
libxt6 -
mafft -
mrbayes -
openssh-client -
phylip -
phyml -
raxml -
readseq -
tree-puzzle -
xdg-utils -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package arb_6.0.6-4_amd64.deb
Source Package arb

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install arb deb package:
    # sudo apt-get install arb

Files

Path
/etc/arb/arb.conf
/etc/arb/arb_tcp.dat
/usr/bin/arb
/usr/bin/arb-kill
/usr/lib/arb/bin/CAP2
/usr/lib/arb/bin/Makefile
/usr/lib/arb/bin/Restriction
/usr/lib/arb/bin/SAI_demo.pl
/usr/lib/arb/bin/Zuk_to_gen
/usr/lib/arb/bin/arb
/usr/lib/arb/bin/arb_2_ascii
/usr/lib/arb/bin/arb_2_bin
/usr/lib/arb/bin/arb_a2ps
/usr/lib/arb/bin/arb_bootstrap
/usr/lib/arb/bin/arb_clean
/usr/lib/arb/bin/arb_consensus_tree
/usr/lib/arb/bin/arb_convert_aln
/usr/lib/arb/bin/arb_db_server
/usr/lib/arb/bin/arb_dist
/usr/lib/arb/bin/arb_dnapars
/usr/lib/arb/bin/arb_dnarates
/usr/lib/arb/bin/arb_echo
/usr/lib/arb/bin/arb_edit4
/usr/lib/arb/bin/arb_export_rates
/usr/lib/arb/bin/arb_export_tree
/usr/lib/arb/bin/arb_fastdnaml
/usr/lib/arb/bin/arb_flush_mem
/usr/lib/arb/bin/arb_gene_probe
/usr/lib/arb/bin/arb_help2xml
/usr/lib/arb/bin/arb_help_useredit.sh
/usr/lib/arb/bin/arb_ign
/usr/lib/arb/bin/arb_installubuntu4arb.sh
/usr/lib/arb/bin/arb_launcher
/usr/lib/arb/bin/arb_ludwig
/usr/lib/arb/bin/arb_macsetup
/usr/lib/arb/bin/arb_message
/usr/lib/arb/bin/arb_naligner
/usr/lib/arb/bin/arb_name_server
/usr/lib/arb/bin/arb_nexus2newick.awk
/usr/lib/arb/bin/arb_notify
/usr/lib/arb/bin/arb_ntree
/usr/lib/arb/bin/arb_panic
/usr/lib/arb/bin/arb_pars
/usr/lib/arb/bin/arb_phylo
/usr/lib/arb/bin/arb_phyml
/usr/lib/arb/bin/arb_primer
/usr/lib/arb/bin/arb_probe
/usr/lib/arb/bin/arb_proml
/usr/lib/arb/bin/arb_proto_2_xsub
/usr/lib/arb/bin/arb_protpars
/usr/lib/arb/bin/arb_pt_server
/usr/lib/arb/bin/arb_raxml
/usr/lib/arb/bin/arb_read_tree
/usr/lib/arb/bin/arb_readlink
/usr/lib/arb/bin/arb_readseq
/usr/lib/arb/bin/arb_remote
/usr/lib/arb/bin/arb_repair
/usr/lib/arb/bin/arb_replace
/usr/lib/arb/bin/arb_rexec
/usr/lib/arb/bin/arb_rnacma
/usr/lib/arb/bin/arb_sed
/usr/lib/arb/bin/arb_sleep
/usr/lib/arb/bin/arb_textedit
/usr/lib/arb/bin/arb_textprint
/usr/lib/arb/bin/arb_trace
/usr/lib/arb/bin/arb_treegen
/usr/lib/arb/bin/arb_wait
/usr/lib/arb/bin/arb_wetc
/usr/lib/arb/bin/arb_who
/usr/lib/arb/bin/axml
/usr/lib/arb/bin/beautifyNewick.pl
/usr/lib/arb/bin/clique
/usr/lib/arb/bin/clustalv
/usr/lib/arb/bin/collect_gene_info.pl
/usr/lib/arb/bin/consense
/usr/lib/arb/bin/contml
/usr/lib/arb/bin/contrast
/usr/lib/arb/bin/count
/usr/lib/arb/bin/dnacomp
/usr/lib/arb/bin/dnadist
/usr/lib/arb/bin/dnainvar
/usr/lib/arb/bin/dnaml
/usr/lib/arb/bin/dnamlk
/usr/lib/arb/bin/dnamove
/usr/lib/arb/bin/dnapars
/usr/lib/arb/bin/dnapenny
/usr/lib/arb/bin/dollop
/usr/lib/arb/bin/dolmove
/usr/lib/arb/bin/dolpenny
/usr/lib/arb/bin/drawgram
/usr/lib/arb/bin/drawtree
/usr/lib/arb/bin/dszmconnect.pl
/usr/lib/arb/bin/embl_gen_long_features.pl
/usr/lib/arb/bin/example_batch_probe_match.sh
/usr/lib/arb/bin/factor
/usr/lib/arb/bin/fastdnaml
/usr/lib/arb/bin/findall
/usr/lib/arb/bin/fitch
/usr/lib/arb/bin/format_dssp.pl
/usr/lib/arb/bin/genbank_gen_long_features.pl
/usr/lib/arb/bin/gendist
/usr/lib/arb/bin/import_from_table.pl
/usr/lib/arb/bin/import_proteomdata.pl
/usr/lib/arb/bin/kitsch
/usr/lib/arb/bin/listDiff.pl
/usr/lib/arb/bin/listMarkedSpecies.pl
/usr/lib/arb/bin/lsadt
/usr/lib/arb/bin/markSpecies.pl
/usr/lib/arb/bin/mix
/usr/lib/arb/bin/move
/usr/lib/arb/bin/neighbor
/usr/lib/arb/bin/pars
/usr/lib/arb/bin/penny
/usr/lib/arb/bin/proml
/usr/lib/arb/bin/promlk
/usr/lib/arb/bin/protdist
/usr/lib/arb/bin/protpars
/usr/lib/arb/bin/puzzle
/usr/lib/arb/bin/raxml2arb.pl
/usr/lib/arb/bin/restdist
/usr/lib/arb/bin/restml
/usr/lib/arb/bin/retree
/usr/lib/arb/bin/seqboot
/usr/lib/arb/bin/sho_helix
/usr/lib/arb/bin/treedist
/usr/lib/arb/bin/varpos
/usr/lib/arb/bin/with_all_marked.pl
/usr/share/applications/arb.desktop
/usr/share/arb/arb.xpm
/usr/share/doc/arb/README.Debian
/usr/share/doc/arb/changelog.Debian.gz
/usr/share/doc/arb/changelog.gz
/usr/share/doc/arb/copyright
/usr/share/man/man1/arb-kill.1.gz
/usr/share/man/man1/arb.1.gz

Changelog

2018-07-17 - Andreas Tille <tille@debian.org>
arb (6.0.6-4) unstable; urgency=medium
* Fix symlink
Closes: #903921
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
2017-12-19 - Andreas Tille <tille@debian.org>
arb (6.0.6-3) unstable; urgency=medium
* Add Indonesian debconf translation
Closes: #862913
* Standards-Version: 4.1.2
2017-09-12 - Fabian Klötzl <fabian@kloetzl.info>
arb (6.0.6-2) unstable; urgency=medium
* Team upload
* Moved packaging to git
* d/control: transfig → fig2dev (Closes: #866151)
* do not create MAFFT symlinks (Closes: #857283)
* bump standards version
2016-12-07 - Andreas Tille <tille@debian.org>
arb (6.0.6-1) unstable; urgency=medium
* New upstream version
* Update Swedish debconf translation (Thanks to Martin Bagge
<brother@bsnet.se>)
Closes: #769879
* Add Catalan debconf templates translation (Thanks to Innocent De Marchi
<tangram.peces@gmail.com>)
Closes: #788004
* debhelper 10
* d/watch: version=4
* d/rules: hardening=+all (but no effect :-()
* Delete menu file
* Install arb_CHANGES.txt as upstream changelog
2016-09-17 - Sascha Steinbiss <satta@debian.org>
arb (6.0.3-2) unstable; urgency=medium
* Team upload.
* Fix building with GCC 6.
- Use correct return type in method definition.
- Allow for newer __cplusplus versions.
Closes: #834170
* Use secure Vcs-Browser. 
* Do not depend on perl-modules.
* Bump Standards-Version.
2015-12-10 - Andreas Tille <tille@debian.org>
arb (6.0.3-1) unstable; urgency=medium
* New upstream version
* Applied all l10n patches - thanks a lot for the great l10n team
for pushing this
* Debconf templates and debian/control reviewed by the debian-l10n-
english team as part of the Smith review project. Closes: #761942
* [Debconf translation updates]
* Danish (Joe Hansen).  Closes: #764869
* Dutch; (Frans Spiesschaert).  Closes: #765088
* Russian (Yuri Kozlov).  Closes: #765096
* Portuguese (Américo Monteiro).  Closes: #761503
* Danish (Joe Hansen).  Closes: #765865
* Czech (Michal Simunek).  Closes: #766600
* Italian (Daniele Forsi).  Closes: #766684
* German (Chris Leick).  Closes: #766689
* French (Steve Petruzzello).  Closes: #766728
* Catalan; (Innocent De Marchi).  Closes: #766855
* Japanese (Hideki Yamane (Debian-JP)).  Closes: #767247
* extra linker flag proposed by Tim Booth
* Lintian override to avoid false positives
* cme fix dpkg-control
* spelling+lintian fixes in d/copyright
2015-07-22 - Andreas Tille <tille@debian.org>
arb (6.0.2-2) unstable; urgency=medium
[ Elmar Pruesse ]
* Add Portugese debconf translation (thanks to Américo Monteiro 
<a_monteiro@gmx.com> for the patch)
Closes: #761503
* Add Russian debconf translation (thanks to Yuri Kozlov 
<yuray@komyakino.ru> for the patch)
Closes: #761616
* debian/arb_CHANGELOG.txt -> debian/changelog (fix lintian complaint)
[ Andreas Tille ]
* Skip compiler version check at all
Closes: #793187

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bison-doc_3.3.2-1_all.deb Documentation for the Bison parser generator
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