r-cran-taxize_0.9.5+dfsg-2_all.deb


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Description

r-cran-taxize - GNU R taxonomic information from around the web

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename r-cran-taxize_0.9.5+dfsg-2_all.deb
Package name r-cran-taxize
Package version 0.9.5+dfsg
Package release 2
Package architecture all
Package type deb
Category gnu-r
Homepage https://cran.r-project.org/package=taxize
License -
Maintainer Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Download size 1.65 MB
Installed size 2.18 MB
GNU R package to interact with a suite of web 'APIs' for taxonomic
tasks, such as verifying species names, and getting taxonomic
'hierarchies'.

Alternatives

Package Version Architecture Repository
r-cran-taxize_0.9.5+dfsg-2_all.deb 0.9.5+dfsg all Debian Main
r-cran-taxize - - -

Requires

Name Value
r-api-3.5 -
r-base-core >= 3.5.2-1
r-cran-ape -
r-cran-bold >= 0.8.6
r-cran-crul >= 0.7.0
r-cran-data.table -
r-cran-foreach -
r-cran-jsonlite -
r-cran-natserv >= 0.3.0
r-cran-plyr -
r-cran-reshape2 -
r-cran-ritis >= 0.7.6
r-cran-rotl >= 3.0.0
r-cran-rredlist >= 0.5.0
r-cran-stringr -
r-cran-tibble >= 1.2
r-cran-wikitaxa >= 0.3.0
r-cran-worrms >= 0.3.2
r-cran-xml2 >= 1.2.0
r-cran-zoo -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package r-cran-taxize_0.9.5+dfsg-2_all.deb
Source Package r-cran-taxize

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install r-cran-taxize deb package:
    # sudo apt-get install r-cran-taxize

Files

Path
/usr/lib/R/site-library/taxize/CITATION
/usr/lib/R/site-library/taxize/DESCRIPTION
/usr/lib/R/site-library/taxize/INDEX
/usr/lib/R/site-library/taxize/NAMESPACE
/usr/lib/R/site-library/taxize/NEWS.md
/usr/lib/R/site-library/taxize/Meta/Rd.rds
/usr/lib/R/site-library/taxize/Meta/data.rds
/usr/lib/R/site-library/taxize/Meta/features.rds
/usr/lib/R/site-library/taxize/Meta/hsearch.rds
/usr/lib/R/site-library/taxize/Meta/links.rds
/usr/lib/R/site-library/taxize/Meta/nsInfo.rds
/usr/lib/R/site-library/taxize/Meta/package.rds
/usr/lib/R/site-library/taxize/Meta/vignette.rds
/usr/lib/R/site-library/taxize/R/taxize
/usr/lib/R/site-library/taxize/R/taxize.rdb
/usr/lib/R/site-library/taxize/R/taxize.rdx
/usr/lib/R/site-library/taxize/data/Rdata.rdb
/usr/lib/R/site-library/taxize/data/Rdata.rds
/usr/lib/R/site-library/taxize/data/Rdata.rdx
/usr/lib/R/site-library/taxize/doc/index.html
/usr/lib/R/site-library/taxize/doc/name_cleaning.Rmd
/usr/lib/R/site-library/taxize/doc/taxize_infotable.Rmd
/usr/lib/R/site-library/taxize/doc/taxize_vignette.Rmd
/usr/lib/R/site-library/taxize/examples/species.txt
/usr/lib/R/site-library/taxize/help/AnIndex
/usr/lib/R/site-library/taxize/help/aliases.rds
/usr/lib/R/site-library/taxize/help/paths.rds
/usr/lib/R/site-library/taxize/help/taxize.rdb
/usr/lib/R/site-library/taxize/help/taxize.rdx
/usr/lib/R/site-library/taxize/html/00Index.html
/usr/lib/R/site-library/taxize/html/R.css
/usr/lib/R/site-library/taxize/ignore/aou_notes.R
/usr/lib/R/site-library/taxize/ignore/nature_serve.R
/usr/lib/R/site-library/taxize/ignore/phylomatic_tree2.R
/usr/lib/R/site-library/taxize/ignore/phytools_fxns_touse.r
/usr/lib/R/site-library/taxize/ignore/rank_ref_script.R
/usr/lib/R/site-library/taxize/ignore/rbladj.r
/usr/lib/R/site-library/taxize/ignore/taxonclass.R
/usr/lib/R/site-library/taxize/ignore/taxonclass2.R
/usr/lib/R/site-library/taxize/ignore/taxonid.R
/usr/lib/R/site-library/taxize/ignore/try_with_timeout.R
/usr/lib/R/site-library/taxize/ignore/tests/test-ubio_classification.R
/usr/lib/R/site-library/taxize/ignore/tests/test-ubio_id.R
/usr/lib/R/site-library/taxize/ignore/tests/test-ubio_namebank.R
/usr/lib/R/site-library/taxize/ignore/tests/test-ubio_search.R
/usr/lib/R/site-library/taxize/ignore/tests/test-ubio_synonyms.R
/usr/lib/R/site-library/taxize/vign/name_cleaning.Rmd
/usr/lib/R/site-library/taxize/vign/name_cleaning.md
/usr/lib/R/site-library/taxize/vign/taxize_infotable.Rmd
/usr/lib/R/site-library/taxize/vign/taxize_infotable.md
/usr/lib/R/site-library/taxize/vign/taxize_vignette.Rmd
/usr/lib/R/site-library/taxize/vign/taxize_vignette.md
/usr/lib/R/site-library/taxize/vign/cache/__packages
/usr/lib/R/site-library/taxize/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.RData
/usr/lib/R/site-library/taxize/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.rdb
/usr/lib/R/site-library/taxize/vign/cache/taxname_0f3fcc7119f159af267de7a029f64f5e.rdx
/usr/lib/R/site-library/taxize/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.RData
/usr/lib/R/site-library/taxize/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.rdb
/usr/lib/R/site-library/taxize/vign/cache/tnrs_c39c1e0c556437f6b37ba3c369e8be54.rdx
/usr/share/doc/r-cran-taxize/README.test
/usr/share/doc/r-cran-taxize/changelog.Debian.gz
/usr/share/doc/r-cran-taxize/copyright
/usr/share/doc/r-cran-taxize/run-unit-test
/usr/share/doc/r-cran-taxize/tests/test-all.R
/usr/share/doc/r-cran-taxize/tests/fixtures/apgFamilies.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/apgOrders.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/bold_ping.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/children_no_results.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_no_results_structure_ncbi_x.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_no_results_structure_ncbi_y.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_no_results_structure_x.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_no_results_structure_y.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_rows_param.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/children_with_id.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/children_with_name.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/class2tree_classification_call.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/classification.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/col_children.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/col_children_bad.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/col_search.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/downstream_col_infraspecies_problem.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/downstream_id_input.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/downstream_multiple_data_sources.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/downstream_names.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/downstream_rows_param.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/eubon_search.yml.gz
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/usr/share/doc/r-cran-taxize/tests/fixtures/fg_name_by_key.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/fg_name_full_by_lsid.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/fg_name_search.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/gbif_downstream.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/gbif_downstream_intermediate.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/gbif_downstream_pagination.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/gbif_parse.yml
/usr/share/doc/r-cran-taxize/tests/fixtures/gbif_ping.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/genbank2uid.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/genbank2uid_fails.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/genbank2uid_gi_numbers.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/get_boldid.yml.gz
/usr/share/doc/r-cran-taxize/tests/fixtures/get_boldid_ask_false.yml
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/usr/share/doc/r-cran-taxize/tests/testthat/test-itis_native.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-itis_ping.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-itis_refs.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-itis_taxrank.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-itis_terms.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-iucn_getname.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-iucn_id.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-iucn_summary.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-key_helpers.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-lowest_common.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-names_list.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-ncbi_children.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-ncbi_get_taxon_summary.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-ping.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-plantminer.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-rankagg.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-sci2comm.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-synonyms.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tax_agg.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tax_name.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tax_rank.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tnrs.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tnrs_sources.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tol_resolve.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_accnames.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_dist.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_refs.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_search.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_summary.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-tp_synonyms.R
/usr/share/doc/r-cran-taxize/tests/testthat/test-vascan_search.r
/usr/share/doc/r-cran-taxize/tests/testthat/test-worms_downstream.R
/usr/share/lintian/overrides/r-cran-taxize

Changelog

2019-02-04 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.5+dfsg-2) unstable; urgency=medium
* Test-Depends: r-cran-vcr
* Set LC_ALL=C.UTF-8 in autopkgtest
Closes: #921338
2019-01-31 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.5+dfsg-1) unstable; urgency=medium
* New upstream version
* debhelper 12
* Standards-Version: 4.3.0
2018-08-30 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.4+dfsg-1) unstable; urgency=medium
* New upstream version
* Standards-Version: 4.2.1
2018-06-06 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.3+dfsg-1) unstable; urgency=medium
* Rebuild for R 3.5 transition
* Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-
lists.debian.net>
* Point Vcs fields to salsa.debian.org
* dh-update-R to update Build-Depends
* Remove autogenerated HTML docs since it is including compressed JS
2018-03-22 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.3-1) unstable; urgency=medium
* New upstream version
2018-03-14 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.2-1) unstable; urgency=medium
* New upstream version
* Standards-Version: 4.1.3
* debhelper 11
* New Build-Depends: r-cran-zoo
* Secure URI in watch file
2017-10-02 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.9.0-1) unstable; urgency=medium
* New upstream version
* Moved packaging from SVN to Git
* Standards-Version: 4.1.1
* Add debian/README.source to document binary data files
* New Build-Depends: r-cran-wikitaxa
2016-12-22 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.8.0-1) unstable; urgency=medium
* New upstream version
Closes: #849073
* New Build-Depends: r-cran-ritis
2016-11-17 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.7.9-1) unstable; urgency=medium
* New upstream version
* Convert to dh-r
* Canonical homepage for CRAN
* d/watch: version=4
* New Build-Depends: r-cran-rotl
* debhelper 10
* Fix autopkgtest
2016-03-31 - Andreas Tille <tille@debian.org>
r-cran-taxize (0.7.4-1) unstable; urgency=low
* Initial release (Closes: #819671)

See Also

Package Description
r-cran-tcltk2_1.2-11-2_all.deb GNU R package for Tcl/Tk additions
r-cran-tcr_2.2.3-1_i386.deb Advanced Data Analysis of Immune Receptor Repertoires
r-cran-teachingdemos_2.10-3_all.deb GNU R Demonstrations for teaching and learning
r-cran-tensor_1.5-3_all.deb GNU R Tensor product of arrays
r-cran-testit_0.9-1_all.deb simple package for testing GNU R packages
r-cran-testthat_2.0.1-1_i386.deb GNU R testsuite
r-cran-tfmpvalue_0.0.8-1_i386.deb GNU R P-Value Computation for Position Weight Matrices
r-cran-tgp_2.4-14-4+b1_i386.deb GNU R Bayesian treed Gaussian process models
r-cran-th.data_1.0-10-1_all.deb GNU R package for datasets by Torsten Hothorn
r-cran-threejs_0.3.1+dfsg-2_all.deb GNU R interactive 3D scatter plots, networks and globes
r-cran-tibble_2.0.1-1_i386.deb GNU R Simple Data Frames
r-cran-tidyr_0.8.2-1_i386.deb GNU R package to easily tidy data
r-cran-tidyselect_0.2.5-1_i386.deb GNU R select from a set of strings
r-cran-tidyverse_1.2.1-1_all.deb Easily Install and Load the 'Tidyverse'
r-cran-tigger_0.3.1-1_all.deb Infers new Immunoglobulin alleles from Rep-Seq Data
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