r-cran-rocr_1.0-7-4_all.deb


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Description

r-cran-rocr - GNU R package to prepare and display ROC curves

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename r-cran-rocr_1.0-7-4_all.deb
Package name r-cran-rocr
Package version 1.0
Package release 7-4
Package architecture all
Package type deb
Category devel::lang:r field::statistics gnu-r implemented-in::r role::program role::shared-lib use::analysing use::viewing
Homepage https://cran.r-project.org/package=ROCR
License -
Maintainer Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Download size 205.63 KB
Installed size 259.00 KB
ROC graphs, sensitivity/specificity curves, lift charts,
and precision/recall plots are popular examples of trade-off
visualizations for specific pairs of performance measures. ROCR is a
flexible tool for creating cutoff-parametrized 2D performance curves
by freely combining two from over 25 performance measures (new
performance measures can be added using a standard interface).
Curves from different cross-validation or bootstrapping runs can be
averaged by different methods, and standard deviations, standard
errors or box plots can be used to visualize the variability across
the runs. The parametrization can be visualized by printing cutoff
values at the corresponding curve positions, or by coloring the
curve according to cutoff. All components of a performance plot can
be quickly adjusted using a flexible parameter dispatching
mechanism. Despite its flexibility, ROCR is easy to use, with only
three commands and reasonable default values for all optional
parameters.
ROCR features: ROC curves, precision/recall plots, lift charts, cost
curves, custom curves by freely selecting one performance measure for the
x axis and one for the y axis, handling of data from cross-validation
or bootstrapping, curve averaging (vertically, horizontally, or by
threshold), standard error bars, box plots, curves that are color-coded
by cutoff, printing threshold values on the curve, tight integration
with Rs plotting facilities (making it easy to adjust plots or to combine
multiple plots), fully customizable, easy to use (only 3 commands).
Performance measures that ROCR knows: Accuracy, error rate, true
positive rate, false positive rate, true negative rate, false negative
rate, sensitivity, specificity, recall, positive predictive value,
negative predictive value, precision, fallout, miss, phi correlation
coefficient, Matthews correlation coefficient, mutual information, chi
square statistic, odds ratio, lift value, precision/recall F measure,
ROC convex hull, area under the ROC curve, precision/recall break-even
point, calibration error, mean cross-entropy, root mean squared error,
SAR measure, expected cost, explicit cost.

Alternatives

Package Version Architecture Repository
r-cran-rocr_1.0-7-4_all.deb 1.0 all Debian Main
r-cran-rocr - - -

Requires

Name Value
r-api-3.5 -
r-base-core >= 3.5.0-5
r-cran-gplots -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package r-cran-rocr_1.0-7-4_all.deb
Source Package r-cran-rocr

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install r-cran-rocr deb package:
    # sudo apt-get install r-cran-rocr

Files

Path
/usr/lib/R/site-library/ROCR/CITATION
/usr/lib/R/site-library/ROCR/DESCRIPTION
/usr/lib/R/site-library/ROCR/INDEX
/usr/lib/R/site-library/ROCR/NAMESPACE
/usr/lib/R/site-library/ROCR/NEWS
/usr/lib/R/site-library/ROCR/Meta/Rd.rds
/usr/lib/R/site-library/ROCR/Meta/data.rds
/usr/lib/R/site-library/ROCR/Meta/demo.rds
/usr/lib/R/site-library/ROCR/Meta/features.rds
/usr/lib/R/site-library/ROCR/Meta/hsearch.rds
/usr/lib/R/site-library/ROCR/Meta/links.rds
/usr/lib/R/site-library/ROCR/Meta/nsInfo.rds
/usr/lib/R/site-library/ROCR/Meta/package.rds
/usr/lib/R/site-library/ROCR/R/ROCR
/usr/lib/R/site-library/ROCR/R/ROCR.rdb
/usr/lib/R/site-library/ROCR/R/ROCR.rdx
/usr/lib/R/site-library/ROCR/data/ROCR.hiv.rda
/usr/lib/R/site-library/ROCR/data/ROCR.simple.rda
/usr/lib/R/site-library/ROCR/data/ROCR.xval.rda
/usr/lib/R/site-library/ROCR/data/datalist
/usr/lib/R/site-library/ROCR/demo/ROCR.R
/usr/lib/R/site-library/ROCR/help/AnIndex
/usr/lib/R/site-library/ROCR/help/ROCR.rdb
/usr/lib/R/site-library/ROCR/help/ROCR.rdx
/usr/lib/R/site-library/ROCR/help/aliases.rds
/usr/lib/R/site-library/ROCR/help/paths.rds
/usr/lib/R/site-library/ROCR/html/00Index.html
/usr/lib/R/site-library/ROCR/html/R.css
/usr/share/doc/r-cran-rocr/README.test
/usr/share/doc/r-cran-rocr/changelog.Debian.gz
/usr/share/doc/r-cran-rocr/copyright
/usr/share/doc/r-cran-rocr/run-unit-test
/usr/share/doc/r-cran-rocr/unittests/XXXrunit.ROCR.aux.RXXX
/usr/share/doc/r-cran-rocr/unittests/runit.aux.r
/usr/share/doc/r-cran-rocr/unittests/runit.consistency.r.gz
/usr/share/doc/r-cran-rocr/unittests/runit.simple.r.gz
/usr/share/doc/r-cran-rocr/unittests/testsuite.ROCR.R

Changelog

2018-06-03 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-7-4) unstable; urgency=medium
* Rebuild for R 3.5 transition
* debhelper 11
* Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-
lists.debian.net>
* Point Vcs fields to salsa.debian.org
* dh-update-R to update Build-Depends
* Secure URI in watch file
2017-10-01 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-7-3) unstable; urgency=medium
* Moved packaging from SVN to Git
* Convert from cdbs to dh-r
* debhelper 10
* Standards-Version: 4.1.1
* Canonical homepage for CRAN packages
* Add debian/README.source to document binary data files
2016-05-03 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-7-2) unstable; urgency=medium
* cme fix dpkg-control
* Fix autopkgtest
* Update copyright
2015-07-17 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-7-1) unstable; urgency=medium
* New upstream version
* cme fix dpkg-control
* debhelper 9
* add autopkgtest
2013-05-19 - Dirk Eddelbuettel <edd@debian.org>
r-cran-rocr (1.0-5-1) unstable; urgency=low
* New upstream release
[Dirk Eddelbuettel]
* Adding myself to uploaders
2012-03-07 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-4-4) unstable; urgency=low
[Dirk Eddelbuettel]
* NAMESPACE: Added with single line 'exportPattern("^[[:alpha:]]+")'
as R now requires a NAMESPACE file to be present  
* debian/control: Set Build-Depends: to current R version
* debian/control: Set Standards-Version: to current version 
* (Re-)building with R 3.0.0
[Andreas Tille]
* debian/upstream
- Remove wrong '|' after Reference field
- Moved DOI and PMID to Reference
2011-10-22 - Charles Plessy <plessy@debian.org>
r-cran-rocr (1.0-4-3) unstable; urgency=low
* Support depending on R pre-releases (debian/rules, Closes: #646157).
* Machine-readable debian/copyright, format 1.0 (DEP 5).
* Distribute unit tests (debian/docs).
* Expanded and moved instructions to test the binary package from
debian/README.Debian to debian/README.test.
2011-10-21 - Andreas Tille <tille@debian.org>
r-cran-rocr (1.0-4-2) unstable; urgency=low
* Rebuild using latest R
Closes: #646044
* Standards-Version: 3.9.2 (no changes needed)
* Debhelper 8 (control+compat)
* Fixed Vcs fields
* debian/source/format: 3.0 (quilt)
* README.Debian: describe how the package was testet
* debian/control: Suggests: r-cran-runit
(because it is described in upstream's README.unittests)
* debian/docs: Install information about unittests
2010-02-03 - Charles Plessy <plessy@debian.org>
r-cran-rocr (1.0-4-1) unstable; urgency=low
* New upstream release.
* Incremented Standards-Version (debian/control) to reflect compliance
with Policy 3.8.4.
* Require a number equal or superior than the R version the package was built
with, using a R:Depends substvar (debian/control, debian/rules).
* Added notes to explain how this package is tested (debian/README.Debian).
2009-10-24 - Steffen Moeller <moeller@debian.org>
r-cran-rocr (1.0-3-3) unstable; urgency=low
* New upstream version.
* Explicitly setting dependency to latest R because of the new R
help system.

See Also

Package Description
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r-cran-rotl_3.0.6-1_all.deb GNU R interface to the 'Open Tree of Life' API
r-cran-roxygen2_6.1.1-1_i386.deb in-line documentation for GNU R
r-cran-rpact_1.0.0-1_i386.deb Confirmatory Adaptive Clinical Trial Design and Analysis
r-cran-rpart_4.1-13-1+b1_i386.deb GNU R package for recursive partitioning and regression trees
r-cran-rpostgresql_0.6-2+dfsg-2_i386.deb GNU R package providing database interface and driver for PostgreSQL
r-cran-rprojroot_1.3-2-2_all.deb GNU R finding files in project subdirectories
r-cran-rprotobuf_0.4.13-1_i386.deb GNU R package providing an interface to the Protocol Buffers API
r-cran-rquantlib_0.4.7-1_i386.deb GNU R package interfacing the QuantLib finance library
r-cran-rredlist_0.5.0-2_all.deb GNU R IUCN Red List Client
r-cran-rsclient_0.7-3-2+b3_i386.deb GNU R package providing an Rserve client
r-cran-rsdmx_0.5-13+dfsg-1_all.deb GNU R package for the Statistical Data and Metadata Exchange (SDMX) framework
r-cran-rserve_1.7-3-3+b4_i386.deb GNU R Rserve tcp/ip server and sample clients
r-cran-rsolnp_1.16+dfsg-3_all.deb GNU R general non-linear optimization
r-cran-rspectra_0.13-1-1_i386.deb GNU R solvers for large-scale eigenvalue and SVD problems
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