microbegps_1.0.0-3_all.deb


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Description

microbegps - explorative taxonomic profiling tool for metagenomic data

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename microbegps_1.0.0-3_all.deb
Package name microbegps
Package version 1.0.0
Package release 3
Package architecture all
Package type deb
Category science
Homepage http://sourceforge.net/projects/microbegps/
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 13.58 MB
Installed size 162.51 MB
MicrobeGPS is a bioinformatics tool for the analysis of metagenomic
sequencing data. The goal is to profile the composition of metagenomic
communities as accurately as possible and present the results to the
user in a convenient manner. One main focus is reliability: the tool
calculates quality metrics for the estimated candidates and allows the
user to identify false candidates easily.

Alternatives

Package Version Architecture Repository
microbegps_1.0.0-3_all.deb 1.0.0 all Debian Main
microbegps - - -

Requires

Name Value
python-matplotlib -
python-matplotlib-venn -
python-numpy -
python-qt4 -
python-scipy -
python:any << 2.8
python:any >= 2.7.5-5~

Download

Type URL
Mirror ftp.br.debian.org
Binary Package microbegps_1.0.0-3_all.deb
Source Package microbegps

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install microbegps deb package:
    # sudo apt-get install microbegps

Files

Path
/usr/bin/MicrobeGPS
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/PKG-INFO
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/dependency_links.txt
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/entry_points.txt
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/requires.txt
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/top_level.txt
/usr/lib/python2.7/dist-packages/MicrobeGPS-1.0.0.egg-info/zip-safe
/usr/lib/python2.7/dist-packages/microbegps/__init__.py
/usr/lib/python2.7/dist-packages/microbegps/__version__.py
/usr/lib/python2.7/dist-packages/microbegps/data
/usr/lib/python2.7/dist-packages/microbegps/gps.py
/usr/lib/python2.7/dist-packages/microbegps/gui.py
/usr/lib/python2.7/dist-packages/microbegps/taxonomy.py
/usr/lib/python2.7/dist-packages/microbegps/valcov.py
/usr/lib/python2.7/dist-packages/microbegps/modules/__init__.py
/usr/lib/python2.7/dist-packages/microbegps/modules/composition_analysis.py
/usr/lib/python2.7/dist-packages/microbegps/modules/export_table.py
/usr/lib/python2.7/dist-packages/microbegps/modules/search_tab.py
/usr/share/doc/microbegps/changelog.Debian.gz
/usr/share/doc/microbegps/copyright
/usr/share/microbegps/data/gui/candidate.png
/usr/share/microbegps/data/gui/error.png
/usr/share/microbegps/data/gui/exit.png
/usr/share/microbegps/data/gui/green.png
/usr/share/microbegps/data/gui/open.png
/usr/share/microbegps/data/gui/red.png
/usr/share/microbegps/data/gui/run.png
/usr/share/microbegps/data/gui/save.png
/usr/share/microbegps/data/gui/sequence.png
/usr/share/microbegps/data/gui/yellow.png
/usr/share/microbegps/data/taxonomy/bact.catalog
/usr/share/microbegps/data/taxonomy/names.dmp
/usr/share/microbegps/data/taxonomy/nodes.dmp

Changelog

2018-07-03 - Andreas Tille <tille@debian.org>
microbegps (1.0.0-3) unstable; urgency=medium
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.4
2015-09-22 - Andreas Tille <tille@debian.org>
microbegps (1.0.0-2) unstable; urgency=medium
* Move packaging to Git
* Wait for upstream to apply 2to3 patch and stick to Python 2 for the moment
* Move images and arch-independant data to /usr/share
* Architecture: all
2015-06-25 - Andreas Tille <tille@debian.org>
microbegps (1.0.0-1) unstable; urgency=low
* Initial release (Closes: #789938)
2015-05-04 - Andreas Tille <tille@debian.org>
microbegps (1.0.0-0ubuntu1) trusty; urgency=low
* Test upload to Debian Med PPA

See Also

Package Description
microbiomeutil-data_20101212+dfsg1-2_all.deb Reference 16S sequences and NAST-alignments used by microbiomeutil tools
microbiomeutil_20101212+dfsg1-2_all.deb Microbiome Analysis Utilities
microcom_2017.03.0-2_i386.deb minimalistic terminal program
microdc2_0.15.6-4+b1_i386.deb command-line based Direct Connect client
microhope_4.4.4+dfsg-4_i386.deb hardware & software framework to learn microcontrollers
micropolis-data_0.0.20071228-9_all.deb real-time city management simulator - data
micropolis_0.0.20071228-9_i386.deb real-time city management simulator
midge_0.2.41-2.1_all.deb A text to MIDI program
midicsv_1.1+dfsg.1-1+b1_i386.deb translate MIDI file to CSV
mididings-doc_0~20120419~ds0-6_all.deb mididings Documentation
mididings_0~20120419~ds0-6_all.deb MIDI router and processor based on Python
midish_1.0.4-1.1+b3_i386.deb shell-like MIDI sequencer/filter
midisnoop_0.1.2~repack0-7+b1_i386.deb MIDI monitor and prober
midori_7.0-2_i386.deb fast, lightweight graphical web browser
mig_1.8-4_i386.deb GNU Mach Interface Generator
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