libsmithwaterman-dev_0.0+git20160702.2610e25-7_i386.deb


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Description

libsmithwaterman-dev - determine similar regions between two strings or genomic sequences (devel)

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename libsmithwaterman-dev_0.0+git20160702.2610e25-7_i386.deb
Package name libsmithwaterman-dev
Package version 0.0+git20160702.2610e25
Package release 7
Package architecture i386
Package type deb
Category devel::library libdevel role::devel-lib
Homepage https://github.com/ekg/smithwaterman
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 41.11 KB
Installed size 154.00 KB
The Smith–Waterman algorithm performs local sequence alignment; that is,
for determining similar regions between two strings or nucleotide or
protein sequences. Instead of looking at the total sequence, the
Smith–Waterman algorithm compares segments of all possible lengths and
optimizes the similarity measure.
This is the development package containing the statically linked
library and the header files.

Alternatives

Package Version Architecture Repository
libsmithwaterman-dev_0.0+git20160702.2610e25-7_amd64.deb 0.0+git20160702.2610e25 amd64 Debian Main
libsmithwaterman-dev - - -

Requires

Name Value
libdisorder-dev -
libsmithwaterman0 = 0.0+git20160702.2610e25-7

Download

Type URL
Mirror ftp.br.debian.org
Binary Package libsmithwaterman-dev_0.0+git20160702.2610e25-7_i386.deb
Source Package libsmithwaterman

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libsmithwaterman-dev deb package:
    # sudo apt-get install libsmithwaterman-dev

Files

Path
/usr/include/smithwaterman/BandedSmithWaterman.h
/usr/include/smithwaterman/IndelAllele.h
/usr/include/smithwaterman/LeftAlign.h
/usr/include/smithwaterman/Mosaik.h
/usr/include/smithwaterman/Repeats.h
/usr/include/smithwaterman/SmithWatermanGotoh.h
/usr/include/smithwaterman/convert.h
/usr/lib/i386-linux-gnu/libsmithwaterman.a
/usr/lib/i386-linux-gnu/libsmithwaterman.so
/usr/lib/i386-linux-gnu/pkgconfig/libsmithwaterman.pc
/usr/share/doc/libsmithwaterman-dev/changelog.Debian.gz
/usr/share/doc/libsmithwaterman-dev/copyright

Changelog

2018-08-13 - Graham Inggs <ginggs@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-7) unstable; urgency=medium
* Team upload
* Mark specific symbols for mips and mipsel as optional
2018-08-06 - Graham Inggs <ginggs@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-6) unstable; urgency=medium
* Team upload
* Add missing symbol, drop Lintian override
* Strip Debian revision from two symbols
* Mark symbols that are optimized away when building with -O3
2018-08-05 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-5) unstable; urgency=medium
* Mark some symbols as optional to build with gcc-8
Closes: #897797
* Make sure the lib is build before the binary (thanks to Andrey
Rahmatullin and Dan Kegel)
* Standards-Version: 4.2.0
* Lintian override for strange false positive
symbols-file-contains-current-version-with-debian-revision
2018-06-12 - Graham Inggs <ginggs@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-4) unstable; urgency=medium
* Team upload
* Fix symbol that seems to be exported on all architectures
* Mark symbols that are optimized away when building with -O3
2018-04-12 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-3) unstable; urgency=medium
* More specific symbols for mips and mipsel
Closes: #895527
2018-04-12 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-2) unstable; urgency=medium
* Specify architectures for symbol with different names on different
architectures
Closes: #895502
2018-04-11 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+git20160702.2610e25-1) unstable; urgency=medium
* d/watch: use mode=git (remove debian/get-orig-source)
* Standards-Version: 4.1.4
* Point Vcs fields to salsa.debian.org
* d/rules: do not parse changelog
* debhelper 11
* hardening=+all
* Add symbols file
2017-07-02 - Sascha Steinbiss <satta@debian.org>
libsmithwaterman (0.0+20160702-3) unstable; urgency=medium
* Team upload.
* Upload to unstable.
* Bump Standards-Version.
2017-02-10 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+20160702-2) experimental; urgency=medium
* Add -ldisorder to LIBS via pkg-config
2016-07-05 - Andreas Tille <tille@debian.org>
libsmithwaterman (0.0+20160702-1) unstable; urgency=medium
* Initial release (Closes: #827916)

See Also

Package Description
libsmithwaterman0_0.0+git20160702.2610e25-7_i386.deb determine similar regions between two strings or genomic sequences (lib)
libsml-dev_0.1.1+git20180125-1_i386.deb Header files for libSML
libsml1_0.1.1+git20180125-1_i386.deb Library for the Smart Messaging Language (SML)
libsmlnj-smlnj_110.79-4_i386.deb Useful libraries for Standard ML of New Jersey
libsmltk0_3.4.0.47.5+syncevolution-1.5.3-1_i386.deb library for SyncML-DS (SyncML Data Sync) clients (shared libraries)
libsmokebase3v5_4.14.3-1+b1_i386.deb SMOKE base library
libsmpeg-dev_0.4.5+cvs20030824-8_i386.deb SDL MPEG Player Library - development files
libsmpeg0_0.4.5+cvs20030824-8_i386.deb SDL MPEG Player Library - shared libraries
libsmpp34-1_1.13.0-2_i386.deb Open PDU SMPP packaging and unpackaging tool
libsmpp34-dev_1.13.0-2_i386.deb Development files for libsmpp34
libsmraw-dev_20181227-1_i386.deb split RAW image format access library -- development files
libsmraw-utils_20181227-1_i386.deb split RAW image format access library -- Utilities
libsmraw1_20181227-1_i386.deb split RAW image format access library
libsms-aql-perl_1.02-2_all.deb Perl extension to send SMS text messages via AQL's SMS service
libsms-send-aql-perl_0.03-1_all.deb SMS::Send driver to send messages via AQL (www.aql.com)
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