libgenome-model-tools-music-perl_0.04-4_all.deb


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Description

libgenome-model-tools-music-perl - module for finding mutations of significance in cancer

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename libgenome-model-tools-music-perl_0.04-4_all.deb
Package name libgenome-model-tools-music-perl
Package version 0.04
Package release 4
Package architecture all
Package type deb
Category devel::lang:perl devel::library implemented-in::perl perl
Homepage https://metacpan.org/release/Genome-Model-Tools-Music
License -
Maintainer Debian Perl Group <pkg-perl-maintainers@lists.alioth.debian.org>
Download size 266.48 KB
Installed size 615.00 KB
The MuSiC suite is a set of tools aimed at discovering the significance of
somatic mutations found within a given cohort of cancer samples, and with
respect to a variety of external data sources.

Alternatives

Package Version Architecture Repository
libgenome-model-tools-music-perl_0.04-4_all.deb 0.04 all Debian Main
libgenome-model-tools-music-perl - - -

Requires

Name Value
libbit-vector-perl -
libgenome-perl -
libregexp-common-perl -
libstatistics-distributions-perl -
libtext-csv-xs-perl -
perl -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package libgenome-model-tools-music-perl_0.04-4_all.deb
Source Package libgenome-model-tools-music-perl

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libgenome-model-tools-music-perl deb package:
    # sudo apt-get install libgenome-model-tools-music-perl

Files

Path
/usr/share/doc/libgenome-model-tools-music-perl/changelog.Debian.gz
/usr/share/doc/libgenome-model-tools-music-perl/changelog.gz
/usr/share/doc/libgenome-model-tools-music-perl/copyright
/usr/share/lintian/overrides/libgenome-model-tools-music-perl
/usr/share/man/man1/genome-music-bmr-calc-bmr.1p.gz
/usr/share/man/man1/genome-music-bmr-calc-covg-helper.1p.gz
/usr/share/man/man1/genome-music-bmr-calc-covg.1p.gz
/usr/share/man/man1/genome-music-bmr-calc-wig-covg.1p.gz
/usr/share/man/man1/genome-music-bmr.1p.gz
/usr/share/man/man1/genome-music-clinical-correlation.1p.gz
/usr/share/man/man1/genome-music-cosmic-omim.1p.gz
/usr/share/man/man1/genome-music-galaxy.1p.gz
/usr/share/man/man1/genome-music-mutation-relation.1p.gz
/usr/share/man/man1/genome-music-path-scan.1p.gz
/usr/share/man/man1/genome-music-pfam.1p.gz
/usr/share/man/man1/genome-music-play.1p.gz
/usr/share/man/man1/genome-music-plot-mutation-relation.1p.gz
/usr/share/man/man1/genome-music-plot.1p.gz
/usr/share/man/man1/genome-music-proximity.1p.gz
/usr/share/man/man1/genome-music-smg.1p.gz
/usr/share/man/man1/genome-music-survival.1p.gz
/usr/share/man/man1/genome-music.1p.gz
/usr/share/man/man1/gmt-music-bmr-calc-bmr.1p.gz
/usr/share/man/man1/gmt-music-bmr-calc-covg-helper.1p.gz
/usr/share/man/man1/gmt-music-bmr-calc-covg.1p.gz
/usr/share/man/man1/gmt-music-bmr-calc-wig-covg.1p.gz
/usr/share/man/man1/gmt-music-bmr.1p.gz
/usr/share/man/man1/gmt-music-clinical-correlation.1p.gz
/usr/share/man/man1/gmt-music-cosmic-omim.1p.gz
/usr/share/man/man1/gmt-music-galaxy.1p.gz
/usr/share/man/man1/gmt-music-mutation-relation.1p.gz
/usr/share/man/man1/gmt-music-path-scan.1p.gz
/usr/share/man/man1/gmt-music-pfam.1p.gz
/usr/share/man/man1/gmt-music-play.1p.gz
/usr/share/man/man1/gmt-music-plot-mutation-relation.1p.gz
/usr/share/man/man1/gmt-music-plot.1p.gz
/usr/share/man/man1/gmt-music-proximity.1p.gz
/usr/share/man/man1/gmt-music-smg.1p.gz
/usr/share/man/man1/gmt-music-survival.1p.gz
/usr/share/man/man1/gmt-music.1p.gz
/usr/share/man/man3/Genome::Model::Tools::Music.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Bmr::CalcBmr.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Bmr::CalcCovg.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Bmr::CalcCovgHelper.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Bmr::CalcWigCovg.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::ClinicalCorrelation.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::MutationRelation.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::PathScan.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::PathScan::CombinePvals.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::PathScan::PathScan.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::PathScan::PopulationPathScan.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Proximity.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Smg.3pm.gz
/usr/share/man/man3/Genome::Model::Tools::Music::Survival.3pm.gz
/usr/share/perl5/Genome/Model/Tools/Music.pm
/usr/share/perl5/Genome/Model/Tools/Music/Base.pm
/usr/share/perl5/Genome/Model/Tools/Music/Bmr.pm
/usr/share/perl5/Genome/Model/Tools/Music/ClinicalCorrelation.pm
/usr/share/perl5/Genome/Model/Tools/Music/ClinicalCorrelation.pm.R
/usr/share/perl5/Genome/Model/Tools/Music/CosmicOmim.pm
/usr/share/perl5/Genome/Model/Tools/Music/Galaxy.pm
/usr/share/perl5/Genome/Model/Tools/Music/MutationRelation.pm
/usr/share/perl5/Genome/Model/Tools/Music/MutationRelation.pm.R
/usr/share/perl5/Genome/Model/Tools/Music/PathScan.pm
/usr/share/perl5/Genome/Model/Tools/Music/Pfam.pm
/usr/share/perl5/Genome/Model/Tools/Music/Play.pm
/usr/share/perl5/Genome/Model/Tools/Music/Plot.pm
/usr/share/perl5/Genome/Model/Tools/Music/Proximity.pm
/usr/share/perl5/Genome/Model/Tools/Music/Smg.pm
/usr/share/perl5/Genome/Model/Tools/Music/Smg.pm.R
/usr/share/perl5/Genome/Model/Tools/Music/Survival.pm
/usr/share/perl5/Genome/Model/Tools/Music/Survival.pm.R
/usr/share/perl5/Genome/Model/Tools/Music/Bmr/Base.pm
/usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcBmr.pm
/usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcCovg.pm
/usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcCovgHelper.pm
/usr/share/perl5/Genome/Model/Tools/Music/Bmr/CalcWigCovg.pm
/usr/share/perl5/Genome/Model/Tools/Music/PathScan/CombinePvals.pm
/usr/share/perl5/Genome/Model/Tools/Music/PathScan/PathScan.pm
/usr/share/perl5/Genome/Model/Tools/Music/PathScan/PopulationPathScan.pm
/usr/share/perl5/Genome/Model/Tools/Music/Plot/MutationRelation.pm
/usr/share/perl5/Genome/Model/Tools/Music/Plot/MutationRelation.pm.R

Changelog

2018-07-05 - Andreas Tille <tille@debian.org>
libgenome-model-tools-music-perl (0.04-4) unstable; urgency=medium
* Team upload
[ Salvatore Bonaccorso ]
* debian/control: Use HTTPS transport protocol for Vcs-Git URI
[ gregor herrmann ]
* debian/copyright: change Copyright-Format 1.0 URL to HTTPS.
* Remove Olivier Sallou from Uploaders. Thanks for your work!
[ Salvatore Bonaccorso ]
* Update Vcs-* headers for switch to salsa.debian.org
[ Andreas Tille ]
* debhelper 11
* Standards-Version: 4.1.4
* Spelling fixes
2016-01-01 - gregor herrmann <gregoa@debian.org>
libgenome-model-tools-music-perl (0.04-3) unstable; urgency=medium
* Team upload.
* Add patch to fix "Can't use 'defined(@array)' error. (Closes: #809583)
* Mark package as autopkgtest-able.
2015-05-31 - gregor herrmann <gregoa@debian.org>
libgenome-model-tools-music-perl (0.04-2) unstable; urgency=medium
* Team upload.
[ gregor herrmann ]
* Strip trailing slash from metacpan URLs.
[ Salvatore Bonaccorso ]
* Update Vcs-Browser URL to cgit web frontend
[ gregor herrmann ]
* debian/control: update Module::Build dependency.
* Declare compliance with Debian Policy 3.9.6.
2013-02-23 - Olivier Sallou <osallou@debian.org>
libgenome-model-tools-music-perl (0.04-1) unstable; urgency=low
* Initial Release (Closes: #701470).

See Also

Package Description
libgenome-perl_0.06-5_all.deb pipelines, tools, and data management for genomics
libgenome0_1.3.11+svn20110227.4616-2_i386.deb toolkit for developing bioinformatic related software
libgenometools0-dev_1.5.10+ds-3_i386.deb development files for GenomeTools
libgenometools0_1.5.10+ds-3_i386.deb versatile genome analysis library
libgentlyweb-utils-java-doc_1.5-2_all.deb Documentation - java utility library used by josql
libgentlyweb-utils-java_1.5-2_all.deb java utility library used by josql
libgeo-coder-googlev3-perl_0.17-1_all.deb Perl module providing access to Google Maps v3 Geocoding API
libgeo-coder-osm-perl_0.03-2_all.deb Geocode addresses with the OpenStreetMap Nominatim API
libgeo-constants-perl_0.06-1_all.deb standard constants used by Geo perl packages
libgeo-coordinates-itm-perl_0.02-2_all.deb conversion module between lat/lon and Irish Transverse Mercator
libgeo-coordinates-osgb-perl_2.20-1_all.deb converting module between Lat/Lon and the British National Grid
libgeo-coordinates-utm-perl_0.11-2_all.deb Perl extension for Latitiude Longitude conversions
libgeo-distance-perl_0.20-4_all.deb calculate distances and closest locations
libgeo-distance-xs-perl_0.13-2+b5_i386.deb calculate distances and closest locations (XS version)
libgeo-ellipsoids-perl_0.16-1_all.deb standard Geo:: ellipsoid a, b, f and 1/f values
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