libbio-scf-perl_1.03-4_i386.deb


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Description

libbio-scf-perl - Perl extension for reading and writing SCF sequence files

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main i386
Package filename libbio-scf-perl_1.03-4_i386.deb
Package name libbio-scf-perl
Package version 1.03
Package release 4
Package architecture i386
Package type deb
Category devel::lang:perl devel::library implemented-in::c implemented-in::perl perl role::devel-lib role::shared-lib
Homepage https://metacpan.org/release/Bio-SCF
License -
Maintainer Debian Perl Group <pkg-perl-maintainers@lists.alioth.debian.org>
Download size 20.79 KB
Installed size 81.00 KB
The Bio::SCF (Standard Chromatogram Format) module allows you to read and
update (in a restricted way) SCF chromatographic sequence files. It is an
interface to Roger Staden's io-lib. It has both tied hash and an
object-oriented interfaces. It provides the ability to read fields from SCF
files and limited ability to modify them and write them back.

Alternatives

Package Version Architecture Repository
libbio-scf-perl_1.03-4_amd64.deb 1.03 amd64 Debian Main
libbio-scf-perl - - -

Requires

Name Value
libc6 >= 2.2
libstaden-read13 -
perl >= 5.28.1-4
perlapi-5.28.1 -
zlib1g >= 1:1.1.4

Download

Type URL
Mirror ftp.br.debian.org
Binary Package libbio-scf-perl_1.03-4_i386.deb
Source Package libbio-scf-perl

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install libbio-scf-perl deb package:
    # sudo apt-get install libbio-scf-perl

Files

Path
/usr/lib/i386-linux-gnu/perl5/5.28/Bio/SCF.pm
/usr/lib/i386-linux-gnu/perl5/5.28/Bio/SCF/Arrays.pm
/usr/lib/i386-linux-gnu/perl5/5.28/auto/Bio/SCF/SCF.so
/usr/share/doc/libbio-scf-perl/changelog.Debian.gz
/usr/share/doc/libbio-scf-perl/changelog.gz
/usr/share/doc/libbio-scf-perl/copyright
/usr/share/doc/libbio-scf-perl/examples/read_test_obj.pl
/usr/share/doc/libbio-scf-perl/examples/read_test_tied.pl
/usr/share/doc/libbio-scf-perl/examples/write_test_obj.pl
/usr/share/doc/libbio-scf-perl/examples/write_test_tied.pl
/usr/share/man/man3/Bio::SCF.3pm.gz

Changelog

2019-02-04 - Andreas Tille <tille@debian.org>
libbio-scf-perl (1.03-4) unstable; urgency=medium
* Team upload.
[ Salvatore Bonaccorso ]
* Update Vcs-* headers for switch to salsa.debian.org
[ gregor herrmann ]
* debian/*: update URLs from {search,www}.cpan.org to MetaCPAN.
[ Andreas Tille ]
* debhelper 12
* Standards-Version: 4.3.0
* Remove trailing whitespace in debian/copyright
2016-12-11 - gregor herrmann <gregoa@debian.org>
libbio-scf-perl (1.03-3) unstable; urgency=medium
* Team upload.
[ Salvatore Bonaccorso ]
* Update Vcs-Browser URL to cgit web frontend
[ gregor herrmann ]
* Mark package as autopkgtest-able.
* Slightly reformat debian/copyright.
* Mention full module name in long description.
* Rename autopkgtest configuration file(s) as per new pkg-perl-
autopkgtest schema.
[ Salvatore Bonaccorso ]
* debian/control: Use HTTPS transport protocol for Vcs-Git URI
[ gregor herrmann ]
* debian/copyright: change Copyright-Format 1.0 URL to HTTPS.
* Add patch 0001-Fix-overflowing-casts-from-pointer-to-integer.patch.
Thanks to Niko Tyni for coming up with the patch.
(Closes: #846731, #775434)
* Set bindnow linker flag in debian/rules.
* Declare compliance with Debian Policy 3.9.8.
2014-04-11 - gregor herrmann <gregoa@debian.org>
libbio-scf-perl (1.03-2) unstable; urgency=low
* Team upload.
[ Ansgar Burchardt ]
* debian/control: Convert Vcs-* fields to Git.
[ Salvatore Bonaccorso ]
* Change Vcs-Git to canonical URI (git://anonscm.debian.org)
* Change search.cpan.org based URIs to metacpan.org based URIs
[ gregor herrmann ]
* Strip trailing slash from metacpan URLs.
* Rename debian/upstream-metadata.yaml to debian/upstream/metadata.
* Switch to "3.0 (quilt)" source format.
* debian/copyright: switch formatting to Copyright-Format 1.0.
* Use debhelper 9.20120312 to get all hardening flags.
* Fix a spelling mistake.
* Declare compliance with Debian Policy 3.9.5.
2010-01-09 - Charles Plessy <plessy@debian.org>
libbio-scf-perl (1.03-1) unstable; urgency=low
[ Charles Plessy ]
* New upstream release acknowledging the change of name of the Staden
io-lib from ‘libread’ to ‘libstaden-read’.
* Removed debian/patches/libread_renamed_libstaden-read.patch and actually
the whole patch system as it was the last patch (debian/control,
debian/rules, debian/patches).
* Centralised information about Upstream in ‘debian/upstream-metadata.yaml’.
* Updated copyright information to mention the Artistic license version 2.
2009-08-16 - Charles Plessy <plessy@debian.org>
libbio-scf-perl (1.01-1) unstable; urgency=low
* Initial Release. (Closes: #513303)

See Also

Package Description
libbio-tools-phylo-paml-perl_1.7.3-2_all.deb Bioperl interface to the PAML suite
libbio-tools-run-alignment-clustalw-perl_1.7.4-1_all.deb Bioperl interface to Clustal W
libbio-tools-run-alignment-tcoffee-perl_1.7.4-1_all.deb Bioperl interface to T-Coffee
libbiococoa-dev_2.2.2-4+b1_i386.deb Bioinformatics framework for GNUstep and Cocoa (development files)
libbiococoa2_2.2.2-4+b1_i386.deb Bioinformatics framework for GNUstep and Cocoa (library files)
libbiojava-java-demos_1.7.1-8_all.deb Example programs for BioJava
libbiojava-java-doc_1.7.1-8_all.deb [Biology] Documentation for BioJava
libbiojava-java_1.7.1-8_all.deb Java API to biological data and applications (default version)
libbiojava1.7-java_1.7.1-8_all.deb Java API to biological data and applications (version 1.7)
libbiojava4-java-doc_4.2.12+dfsg-2_all.deb [Biology] Documentation for BioJava
libbiojava4-java_4.2.12+dfsg-2_all.deb Java API to biological data and applications (default version)
libbiojava4.0-java_4.2.12+dfsg-2_all.deb Java API to biological data and applications (version 4)
libbiometric-dev_0.9.61-2_i386.deb Biometric Identification DRIVER API - development files
libbiometric0_0.9.61-2_i386.deb Biometric Identification library
libbioparser-dev_1.2.1-1_all.deb library for parsing several formats in bioinformatics
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