njplot_2.4-8_amd64.deb


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Description

njplot - phylogenetic tree drawing program

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main amd64
Package filename njplot_2.4-8_amd64.deb
Package name njplot
Package version 2.4
Package release 8
Package architecture amd64
Package type deb
Category field::biology field::biology:bioinformatics implemented-in::c interface::commandline interface::graphical interface::x11 role::program science scope::utility uitoolkit::motif use::analysing use::editing use::organizing use::printing use::viewing works-with-format::plaintext works-with::biological-sequence x11::application
Homepage http://pbil.univ-lyon1.fr/software/njplot
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 94.55 KB
Installed size 325.00 KB
NJplot is able to draw any dendrogram expressed in the Newick standard
phylogenetic tree format (e.g., the format used by the Phylip package).
NJplot is especially convenient for rooting the unrooted trees
obtained from parsimony, distance or maximum likelihood tree-building
methods.

Alternatives

Package Version Architecture Repository
njplot_2.4-8_i386.deb 2.4 i386 Debian Main
njplot - - -

Requires

Name Value
libc6 >= 2.14
libncbi6 >= 6.1.20030421
libvibrant6b >= 6.1.20060507
libxm4 >= 2.3.4
libxt6 -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package njplot_2.4-8_amd64.deb
Source Package njplot

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install njplot deb package:
    # sudo apt-get install njplot

Files

Path
/usr/bin/newicktops
/usr/bin/newicktotxt
/usr/bin/njplot
/usr/bin/unrooted
/usr/lib/mime/packages/njplot
/usr/share/applications/njplot.desktop
/usr/share/applications/unrooted.desktop
/usr/share/doc-base/njplot
/usr/share/doc/njplot/README
/usr/share/doc/njplot/changelog.Debian.gz
/usr/share/doc/njplot/copyright
/usr/share/doc/njplot/helpers.html
/usr/share/doc/njplot/njplot.gif
/usr/share/doc/njplot/njplot.html
/usr/share/doc/njplot/examples/bigtree.phb.gz
/usr/share/doc/njplot/examples/example.phb
/usr/share/doc/njplot/examples/multi.phb
/usr/share/man/man1/newicktops.1.gz
/usr/share/man/man1/newicktotxt.1.gz
/usr/share/man/man1/njplot.1.gz
/usr/share/man/man1/unrooted.1.gz
/usr/share/mime/packages/njplot.xml
/usr/share/njplot/njplot.help

Changelog

2018-07-29 - Andreas Tille <tille@debian.org>
njplot (2.4-8) unstable; urgency=medium
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.1.5
2017-01-14 - Sascha Steinbiss <satta@debian.org>
njplot (2.4-7) unstable; urgency=medium
* Team upload.
[ Andreas Tille and Sascha Steinbiss ]
* Add xauth to autopkgtest dependencies
* Use GLX extension for xvfb
2017-01-14 - Andreas Tille <tille@debian.org>
njplot (2.4-6) unstable; urgency=medium
* autopkgtest needs running X server - use xvfb
* debhelper 10
2016-11-03 - Canberk Koç  <canberkkoc@gmail.com>
njplot (2.4-4) unstable; urgency=medium
* Team upload
[ Andreas Tille ]
* Packaging moved from SVN to Git
* cme fix dpkg-control
* hardening=+all
[ Canberk Koç ]
* Autopkgtest added
2016-01-15 - Andreas Tille <tille@debian.org>
njplot (2.4-3) unstable; urgency=medium
[ Charles Plessy ]
* Drop menu file as per decision of the Technical Committee.
[ Andreas Tille ]
* Moved debian/upstream to debian/upstream/metadata
* cme fix dpkg-control
* debhelper 9
* Build using dh instead of cdbs
* Add missing DEP3 header
* Propagate hardening options
* Add doc-base control file
2013-05-29 - Aaron M. Ucko <ucko@debian.org>
njplot (2.4-2) unstable; urgency=low
[ Aaron M. Ucko ]
* Team upload.
* Eliminate extraneous build dependencies, most critically lesstif2-dev,
as Vibrant has switched to Motif now that it's free.  (Closes: #710205.)
* debian/rules: Contrive to pass hardened CPPFLAGS and LDFLAGS.
* Standards-Version: 3.9.4.  (Already compliant.)
[ Charles Plessy ]
* debian/patches/fix-underlinking.patch (new): Explicitly link njplot and
unrooted against -lm for compatibility with strict linkers (as on Ubuntu)
that default to --no-copy-dt-needed.  (Closes: #701756.  LP: #1133488.)
[ Andreas Tille ]
* debian/upstream: Added citation information
2012-01-04 - Charles Plessy <plessy@debian.org>
njplot (2.4-1) unstable; urgency=low
* New upstream release integrating Debian patches.
* Removed debian/patches.
* Updated debian/copyright to latest format and removed superfluous fields.
* Simplified Homepage URL (debian/control).
2011-12-23 - Andreas Tille <tille@debian.org>
njplot (2.3-4) unstable; urgency=low
* Fix FTBFS with -Werror=format-security (Thanks for the
patch to Ilya Barygin <randomaction@ubuntu.com>)
Closes: #653001
* debian/control:
- Standards-Version: 3.9.2 (no changes needed)
- Fixed Vcs fields
- Removed article in short description
* Debhelper 8 (control+compat)
2011-02-22 - Andreas Tille <tille@debian.org>
njplot (2.3-3) unstable; urgency=low
* Standards-Version: 3.9.1 (no changes needed)
* debian/source/format: 3.0 (quilt)
* debian/rules: Do not use deprecated variable DEB_OPT_FLAG any
more but use CFLAGS instead
Closes: #614432
* debian/patches: Do not link against unused libs (X11, Xmu)
2009-02-25 - Charles Plessy <plessy@debian.org>
njplot (2.3-2) unstable; urgency=low
* debian/control:
- Mention that the trees are phylogenetic and in Newick format.
Closes: #517010
- Added missing comma in the Depends field.
* debian/get-orig-source: obsolete, removed. (Also in debian/rules).

See Also

Package Description
nkf_2.1.5-1_amd64.deb Network Kanji code conversion Filter
nlkt_0.3.2.6-2_amd64.deb non-linear keyboard trainer
nload_0.7.4-2+b1_amd64.deb realtime console network usage monitor
nlohmann-json-dev_2.1.1-1.1_all.deb JSON for Modern C++
nlohmann-json3-dev_3.5.0-0.1_all.deb JSON for Modern C++
nm-tray-l10n_0.4.2-1_all.deb Language package for nm-tray
nm-tray_0.4.2-1_amd64.deb Simple Network Manager frontend written in Qt
nmap-common_7.70+dfsg1-6_all.deb Architecture independent files for nmap
nmap_7.70+dfsg1-6_amd64.deb The Network Mapper
nmapsi4_0.5~alpha1-3_amd64.deb graphical interface to nmap, the network scanner
nmh_1.7.1-4_amd64.deb set of electronic mail handling programs
nml_0.4.5-1_amd64.deb newgrf meta language compiler
nmon_16i+debian-2_amd64.deb performance monitoring tool for Linux
nmzmail_1.1-2+b1_amd64.deb indexes and searches email in maildir folders
nn_6.7.3-10+b2_amd64.deb Heavy-duty USENET news reader (curses-based client)
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