adapterremoval-examples_2.2.3-1_all.deb


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Description

adapterremoval-examples - rapid adapter trimming, identification, and read merging (example data)

Property Value
Distribution Debian 10 (Buster)
Repository Debian Main amd64
Package filename adapterremoval-examples_2.2.3-1_all.deb
Package name adapterremoval-examples
Package version 2.2.3
Package release 1
Package architecture all
Package type deb
Category science
Homepage https://github.com/MikkelSchubert/adapterremoval
License -
Maintainer Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Download size 369.91 KB
Installed size 384.00 KB
This program searches for and removes remnant adapter sequences from High-
Throughput Sequencing (HTS) data and (optionally) trims low quality
bases from the 3' end of reads following adapter removal. AdapterRemoval
can analyze both single end and paired end data, and can be used to
merge overlapping paired-ended reads into (longer) consensus sequences.
Additionally, the AdapterRemoval may be used to recover a consensus
adapter sequence for paired-ended data, for which this information is
not available.
This package provides the example data.

Alternatives

Package Version Architecture Repository
adapterremoval-examples_2.2.3-1_all.deb 2.2.3 all Debian Main
adapterremoval-examples - - -

Download

Type URL
Mirror ftp.br.debian.org
Binary Package adapterremoval-examples_2.2.3-1_all.deb
Source Package adapterremoval

Install Howto

  1. Update the package index:
    # sudo apt-get update
  2. Install adapterremoval-examples deb package:
    # sudo apt-get install adapterremoval-examples

Files

Path
/usr/share/doc/adapterremoval-examples/changelog.Debian.gz
/usr/share/doc/adapterremoval-examples/changelog.gz
/usr/share/doc/adapterremoval-examples/copyright
/usr/share/doc/adapterremoval/examples/Makefile
/usr/share/doc/adapterremoval/examples/adapters.txt
/usr/share/doc/adapterremoval/examples/barcodes.txt
/usr/share/doc/adapterremoval/examples/demux_1.fq.gz
/usr/share/doc/adapterremoval/examples/demux_2.fq.gz
/usr/share/doc/adapterremoval/examples/interleaved.fq.gz
/usr/share/doc/adapterremoval/examples/mixed_1.fq.gz
/usr/share/doc/adapterremoval/examples/mixed_2.fq.gz
/usr/share/doc/adapterremoval/examples/reads_1.fq.gz
/usr/share/doc/adapterremoval/examples/reads_2.fq.gz
/usr/share/doc/adapterremoval/examples/reads_q64.fq.gz

Changelog

2019-01-27 - Andreas Tille <tille@debian.org>
adapterremoval (2.2.3-1) unstable; urgency=medium
* New upstream version
* debhelper 12
* Standards-Version: 4.3.0
* Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
2018-09-21 - Andreas Tille <tille@debian.org>
adapterremoval (2.2.2-2) unstable; urgency=medium
[ Steffen Moeller ]
* debian/upstream/metadata:
- Added references to registries
- yamllint cleanliness
[ Andreas Tille ]
* debhelper 11
* Point Vcs fields to salsa.debian.org
* Standards-Version: 4.2.1
2017-07-18 - Kevin Murray <kdmfoss@gmail.com>
adapterremoval (2.2.2-1) unstable; urgency=medium
* New upstream version 2.2.2
2017-07-17 - Andreas Tille <tille@debian.org>
adapterremoval (2.2.1a-1) unstable; urgency=medium
* New upstream version (adapt patches)
* Enable letters in watch file expression
* Standards-Version: 4.0.0 (no changes needed)
* d/rules: use DEB_SOURCE
2017-06-22 - Andreas Tille <tille@debian.org>
adapterremoval (2.2.1-1) unstable; urgency=medium
* New upstream version
* Drop spelling patch
* debhelper 10
* verified watch file and set version=4
2016-12-04 - Kevin Murray <spam@kdmurray.id.au>
adapterremoval (2.2.0-1) unstable; urgency=medium
[ Kevin Murray ]
* Team upload
* New upstream version 2.2.0 (Closes: #846664)
* Refresh patches
[ Andreas Tille ]
* Fix spelling
* DEP3 for benchmarking patches
2016-07-28 - Andreas Tille <tille@debian.org>
adapterremoval (2.1.7-1) unstable; urgency=medium
* Initial release (Closes: #832754)

See Also

Package Description
adapterremoval_2.2.3-1_amd64.deb rapid adapter trimming, identification, and read merging of gene sequences
adb_8.1.0+r23-5_amd64.deb Android Debug Bridge
adcli_0.8.2-1+b1_amd64.deb Tool for performing actions on an Active Directory domain
addresses-goodies-for-gnustep_0.4.8-3+b1_amd64.deb Personal Address Manager for GNUstep (Goodies)
addressmanager.app_0.4.8-3+b1_amd64.deb Personal Address Manager for GNUstep
adduser_3.118_all.deb add and remove users and groups
adequate_0.15.2_all.deb Debian package quality testing tool
adjtimex_1.29-10_amd64.deb kernel time variables configuration utility
admesh_0.98.3-3_amd64.deb Tool for processing triangulated solid meshes. Binary
adminer_4.7.1-1_all.deb Web-based database administration tool
adms_2.3.6-2_amd64.deb Automatic device model synthesizer for Verilog-AMS
adns-tools_1.5.0~rc1-1.1_amd64.deb Asynchronous-capable DNS client utilities
adonthell-data_0.3.8-1_all.deb Data files needed by Adonthell
adonthell_0.3.8-1_amd64.deb 2D graphical roleplaying game
adplay_1.7-4_amd64.deb console-based OPL2 audio player
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